RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 PRO1854Q9UHT4 67 aa11.29□□□□□ -0.6
SH3PXD2A-204ENST00000420222 VPS13CQ709C8 3753 aa11.29□□□□□ -0.6
SH3PXD2A-204ENST00000420222 COX6B1P14854 86 aa11.29□□□□□ -0.6
SH3PXD2A-204ENST00000420222 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
SH3PXD2A-204ENST00000420222 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
SH3PXD2A-204ENST00000420222 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
SH3PXD2A-204ENST00000420222 MUC6Q6W4X9 2439 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 IGLV4-69A0A075B6H9 119 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 UBE2D3P61077 147 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 UBE2D2P62837 147 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 ZNF56Q15929 161 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 LY6EQ16553 131 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 M0R1W7 72 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 PMVKQ15126 192 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 ZNRF2Q8NHG8 242 aa11.28□□□□□ -0.6
SH3PXD2A-204ENST00000420222 J3QQQ9 107 aa11.27□□□□□ -0.6
SH3PXD2A-204ENST00000420222 Q8N6K4 173 aa11.27□□□□□ -0.6
SH3PXD2A-204ENST00000420222 SDHAF1A6NFY7 115 aa11.27□□□□□ -0.61
SH3PXD2A-204ENST00000420222 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.61
SH3PXD2A-204ENST00000420222 ATP6V0E2Q8NHE4 81 aa11.27□□□□□ -0.61
SH3PXD2A-204ENST00000420222 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
SH3PXD2A-204ENST00000420222 SNCGO76070 127 aa11.27□□□□□ -0.61
SH3PXD2A-204ENST00000420222 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
SH3PXD2A-204ENST00000420222 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
SH3PXD2A-204ENST00000420222 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 SUMO4Q6EEV6 95 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 C2CD3Q4AC94 2353 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 ELANEP08246 267 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 RNASE3P12724 160 aaKnown RBP11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 EDN2P20800 178 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 AJUBAQ96IF1 538 aa11.26□□□□□ -0.61
SH3PXD2A-204ENST00000420222 TRAV4A0A0B4J268 109 aa11.25□□□□□ -0.61
SH3PXD2A-204ENST00000420222 CRLF1O75462 422 aa11.25□□□□□ -0.61
SH3PXD2A-204ENST00000420222 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
SH3PXD2A-204ENST00000420222 TEX49A0A1B0GTD5 131 aa11.25□□□□□ -0.61
SH3PXD2A-204ENST00000420222 GPHB5Q86YW7 130 aa11.25□□□□□ -0.61
SH3PXD2A-204ENST00000420222 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 NCOR2Q9Y618 2525 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 PF4V1P10720 104 aa11.24□□□□□ -0.61
SH3PXD2A-204ENST00000420222 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
SH3PXD2A-204ENST00000420222 SPXQ9BT56 116 aa11.23□□□□□ -0.61
SH3PXD2A-204ENST00000420222 LINC01619G3V211 115 aa11.23□□□□□ -0.61
SH3PXD2A-204ENST00000420222 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 TRAV41A0A0B4J266 112 aa11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 Q6ZSV7 163 aa11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 SLC25A29Q8N8R3 303 aa11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 PRRC2AP48634 2157 aaKnown RBP11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 KLK9Q9UKQ9 250 aa11.22□□□□□ -0.61
SH3PXD2A-204ENST00000420222 MINOS1Q5TGZ0 78 aa11.21□□□□□ -0.61
SH3PXD2A-204ENST00000420222 MINOS1-NBL1R4GNA1 71 aa11.21□□□□□ -0.61
SH3PXD2A-204ENST00000420222 IGIPA6NJ69 53 aa11.21□□□□□ -0.62
SH3PXD2A-204ENST00000420222 CCDC179H3BU77 68 aa11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 VCYO14598 125 aa11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 SVIPQ8NHG7 77 aa11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 GAGE5Q13069 117 aa11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 GAGE6Q13070 117 aa11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 Q8N1Y9 231 aa11.2□□□□□ -0.62
SH3PXD2A-204ENST00000420222 A8MZ25 164 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 OVOL1O14753 267 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 EIF4EBP3O60516 100 aaPredicted RBP11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 ITLN2Q8WWU7 325 aaPredicted RBP11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 MRPL53Q96EL3 112 aaKnown RBP11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 TRAV8-3A0A0A6YYJ7 113 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 CSMD2Q7Z408 3487 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 EBI3Q14213 229 aa11.19□□□□□ -0.62
SH3PXD2A-204ENST00000420222 FOXC1Q12948 553 aa11.18□□□□□ -0.62
SH3PXD2A-204ENST00000420222 TRAV8-4A0A0B4J246 113 aa11.18□□□□□ -0.62
SH3PXD2A-204ENST00000420222 DAND5Q8N907 189 aa11.18□□□□□ -0.62
SH3PXD2A-204ENST00000420222 BPESC1Q9GZL8 116 aa11.18□□□□□ -0.62
SH3PXD2A-204ENST00000420222 SIRPDQ9H106 197 aa11.18□□□□□ -0.62
SH3PXD2A-204ENST00000420222 PPP1R17O96001 155 aa11.17□□□□□ -0.62
SH3PXD2A-204ENST00000420222 C15orf53Q8NAA6 179 aa11.17□□□□□ -0.62
SH3PXD2A-204ENST00000420222 OOSP1A8MZH6 123 aa11.17□□□□□ -0.62
SH3PXD2A-204ENST00000420222 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
SH3PXD2A-204ENST00000420222 CLEC2BQ92478 149 aa11.17□□□□□ -0.62
SH3PXD2A-204ENST00000420222 NPFFO15130 113 aa11.17□□□□□ -0.62
SH3PXD2A-204ENST00000420222 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
SH3PXD2A-204ENST00000420222 VCX2Q9H322 139 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms