RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 PIRTP0C851 137 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 LINC00694P0DN24 101 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 CCL3L1P16619 93 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 SSBP1Q04837 148 aaKnown RBP0.16□□□□□ -2.38
HDAC9-205ENST00000411993 ALX1Q15699 326 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 FAM74A4Q5TZK3 123 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 SPANXN1Q5VSR9 72 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 C20orf197Q8N268 126 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 COX7B2Q8TF08 81 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 PSMG3Q9BT73 122 aaPredicted RBP0.16□□□□□ -2.38
HDAC9-205ENST00000411993 COPZ2Q9P299 210 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 ZNF142P52746 1687 aaPredicted RBP0.16□□□□□ -2.38
HDAC9-205ENST00000411993 KDM6BO15054 1643 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 ABCA4P78363 2273 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 JMJD1CQ15652 2540 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 CDK5RAP2Q96SN8 1893 aa0.16□□□□□ -2.38
HDAC9-205ENST00000411993 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
HDAC9-205ENST00000411993 PRG4Q92954 1404 aaPredicted RBP0.15□□□□□ -2.39
HDAC9-205ENST00000411993 CDK13Q14004 1512 aaKnown RBP0.15□□□□□ -2.39
HDAC9-205ENST00000411993 A0A087WTM6 91 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 TRBV7-1A0A0A6YYK4 115 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 LOC105371267A0A1B0GV96 52 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 A6NIN4 97 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 NCR2O95944 276 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 TSPAN19P0C672 248 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 SMIM21Q3B7S5 101 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 SLC48A1Q6P1K1 146 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 Q6ZUT4 128 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 ANP32BQ92688 251 aaKnown RBP0.15□□□□□ -2.39
HDAC9-205ENST00000411993 TPT1P8Q9HAU6 139 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 RPRMQ9NS64 109 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 TMEM242Q9NWH2 141 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 V9GYV3 84 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 FSIP2Q5CZC0 6907 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 MYH13Q9UKX3 1938 aa0.15□□□□□ -2.39
HDAC9-205ENST00000411993 SOGA1O94964 1423 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 PIEZO1Q92508 2521 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 MAST4O15021 2626 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 CEP152O94986 1710 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 GVQW2A0A096LPI5 108 aaPredicted RBP0.14□□□□□ -2.39
HDAC9-205ENST00000411993 NPFFO15130 113 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 APODP05090 189 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 IL5P05113 134 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 RRAS2P62070 204 aaPredicted RBP0.14□□□□□ -2.39
HDAC9-205ENST00000411993 SMCO1Q147U7 214 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 SMIM11BQ8TCY0 68 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 VIRMAQ69YN4 1812 aaKnown RBP0.14□□□□□ -2.39
HDAC9-205ENST00000411993 TTC28Q96AY4 2481 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 LAMC3Q9Y6N6 1575 aa0.14□□□□□ -2.39
HDAC9-205ENST00000411993 FHAD1B1AJZ9 1412 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 TPRP12270 2363 aaKnown RBP0.13□□□□□ -2.39
HDAC9-205ENST00000411993 MED13LQ71F56 2210 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 SNCGO76070 127 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 IFNA17P01571 189 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 PIPP12273 146 aaPredicted RBP0.13□□□□□ -2.39
HDAC9-205ENST00000411993 ACYP2P14621 99 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 COPZ1P61923 177 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 UBE2G1P62253 170 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 RPS25P62851 125 aaKnown RBP0.13□□□□□ -2.39
HDAC9-205ENST00000411993 COX6A2Q02221 97 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 C9orf116Q5BN46 136 aaPredicted RBP0.13□□□□□ -2.39
HDAC9-205ENST00000411993 SCIMPQ6UWF3 145 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 KCNRGQ8N5I3 272 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 C10orf82Q8WW14 230 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 SPTSSAQ969W0 71 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 PFDN5Q99471 154 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 ZFYVE26Q68DK2 2539 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 F5P12259 2224 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 NRXN2Q9P2S2 1712 aa0.13□□□□□ -2.39
HDAC9-205ENST00000411993 FRAS1Q86XX4 4008 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 CACNA1HO95180 2353 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 PLXNA1Q9UIW2 1896 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 ADGRB1O14514 1584 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 UNC13BO14795 1591 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
HDAC9-205ENST00000411993 TMEM2Q9UHN6 1383 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 PITX3O75364 302 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 SPINK1P00995 79 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 NMBP08949 121 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 GCHFRP30047 84 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 GUCA1AP43080 201 aaPredicted RBP0.12□□□□□ -2.39
HDAC9-205ENST00000411993 EDDM3BP56851 147 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 S100A7L2Q5SY68 101 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 SPTSSBQ8NFR3 76 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 TCEAL4Q96EI5 215 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 Q96NJ1 140 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 MYH6P13533 1939 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 ABCA12Q86UK0 2595 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 PHIPQ8WWQ0 1821 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 DAPK1P53355 1430 aa0.12□□□□□ -2.39
HDAC9-205ENST00000411993 MUC22E2RYF6 1773 aaPredicted RBP0.11□□□□□ -2.39
HDAC9-205ENST00000411993 SSC5DA1L4H1 1573 aa0.11□□□□□ -2.39
HDAC9-205ENST00000411993 IBTKQ9P2D0 1353 aaPredicted RBP0.11□□□□□ -2.39
HDAC9-205ENST00000411993 TRGV1A0A0A0MS02 117 aa0.11□□□□□ -2.39
HDAC9-205ENST00000411993 TMEM14DPA8MWL7 114 aa0.11□□□□□ -2.39
HDAC9-205ENST00000411993 NDUFB6O95139 128 aa0.11□□□□□ -2.39
HDAC9-205ENST00000411993 CBLN1P23435 193 aa0.11□□□□□ -2.39
HDAC9-205ENST00000411993 UBE2D1P51668 147 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms