RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ACANP16112 2415 aa8.18□□□□□ -1.1
COL4A4-201ENST00000396625 IGHV7-4-1A0A0J9YVY3 117 aa8.18□□□□□ -1.1
COL4A4-201ENST00000396625 LY6HO94772 140 aa8.18□□□□□ -1.1
COL4A4-201ENST00000396625 A4D1N5 150 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 G3V318 75 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 K7EQD1 137 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 IGLV3-19P01714 112 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 GYPEP15421 78 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 G3V4G9 280 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 DAZ2Q13117 558 aaKnown RBP8.17□□□□□ -1.1
COL4A4-201ENST00000396625 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
COL4A4-201ENST00000396625 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
COL4A4-201ENST00000396625 FAM236DA0A1B0GTK5 79 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 FAM236CP0DP71 79 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 COL8A2P25067 703 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 LYPD6Q86Y78 171 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 RPL39LQ96EH5 51 aaKnown RBP8.17□□□□□ -1.1
COL4A4-201ENST00000396625 Q6ZUT4 128 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 COL4A5P29400 1685 aa8.17□□□□□ -1.1
COL4A4-201ENST00000396625 C5orf63A6NC05 138 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 K7EN84 100 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 CXCL5P42830 114 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 NOTCH2Q04721 2471 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 WI2-2373I1.2A0A1W2PRP0 233 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 WFDC2Q14508 124 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 RNF152Q8N8N0 203 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 MSMBP08118 114 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
COL4A4-201ENST00000396625 GNRH2O43555 120 aa8.15□□□□□ -1.1
COL4A4-201ENST00000396625 RBAKDNA6NC62 111 aa8.15□□□□□ -1.1
COL4A4-201ENST00000396625 IL15RAQ13261 267 aa8.15□□□□□ -1.1
COL4A4-201ENST00000396625 PDE6GP18545 87 aa8.15□□□□□ -1.1
COL4A4-201ENST00000396625 FAM120AOSQ5T036 256 aa8.15□□□□□ -1.1
COL4A4-201ENST00000396625 LECT2O14960 151 aa8.15□□□□□ -1.11
COL4A4-201ENST00000396625 ZNF726P1Q15940 193 aa8.15□□□□□ -1.11
COL4A4-201ENST00000396625 RNF223E7ERA6 249 aa8.15□□□□□ -1.11
COL4A4-201ENST00000396625 COL5A1P20908 1838 aaPredicted RBP8.14□□□□□ -1.11
COL4A4-201ENST00000396625 IGKV2D-26A0A0A0MRZ7 120 aa8.14□□□□□ -1.11
COL4A4-201ENST00000396625 A6NED7 52 aa8.14□□□□□ -1.11
COL4A4-201ENST00000396625 CDPF1Q6NVV7 123 aa8.14□□□□□ -1.11
COL4A4-201ENST00000396625 RNASE8Q8TDE3 154 aaKnown RBP8.14□□□□□ -1.11
COL4A4-201ENST00000396625 IGHV1-69DA0A0B4J2H0 117 aa8.14□□□□□ -1.11
COL4A4-201ENST00000396625 IGHV1-69P01742 117 aa8.14□□□□□ -1.11
COL4A4-201ENST00000396625 ADAMTS20P59510 1910 aa8.14□□□□□ -1.11
COL4A4-201ENST00000396625 NDUFA1O15239 70 aa8.14□□□□□ -1.11
COL4A4-201ENST00000396625 WISP1O95388 367 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 C20orf173Q96LM9 149 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 C16orf74Q96GX8 76 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 FXYD2P54710 66 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 ARTNQ5T4W7 220 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 RNF144BQ7Z419 303 aa8.13□□□□□ -1.11
COL4A4-201ENST00000396625 IGLV2-23P01705 113 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 MAPK1IP1LQ8NDC0 245 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
COL4A4-201ENST00000396625 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 Q71RC1 249 aaPredicted RBP8.12□□□□□ -1.11
COL4A4-201ENST00000396625 UQCRQO14949 82 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 GNLYP22749 145 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 B9D2Q9BPU9 175 aa8.12□□□□□ -1.11
COL4A4-201ENST00000396625 IGKV1-6A0A0C4DH72 117 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 NDUFC1O43677 76 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 TM2D2Q9BX73 214 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 SETD2Q9BYW2 2564 aaPredicted RBP8.11□□□□□ -1.11
COL4A4-201ENST00000396625 H3BT86 120 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 IGHV3-30P01768 117 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 IGHV3-33P01772 117 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 IGHV3-30-3P0DP02 117 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 IGHV3-30-5P0DP03 117 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 WT1-ASQ06250 92 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 BPY2O14599 106 aa8.11□□□□□ -1.11
COL4A4-201ENST00000396625 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 IGHV4-59P01825 116 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 WFDC11Q8NEX6 87 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 K7EM74 188 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 TRBV7-3A0A075B6L6 115 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 FLVCR1-AS1Q8TAF5 88 aa8.1□□□□□ -1.11
COL4A4-201ENST00000396625 PRR30Q53SZ7 412 aaPredicted RBP8.1□□□□□ -1.11
COL4A4-201ENST00000396625 FGF23Q9GZV9 251 aaPredicted RBP8.1□□□□□ -1.11
COL4A4-201ENST00000396625 E7EQL1 145 aa8.09□□□□□ -1.11
COL4A4-201ENST00000396625 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.09□□□□□ -1.11
COL4A4-201ENST00000396625 SLX1AQ9BQ83 275 aa8.09□□□□□ -1.11
COL4A4-201ENST00000396625 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
COL4A4-201ENST00000396625 WFDC10BQ8IUB3 73 aa8.09□□□□□ -1.11
COL4A4-201ENST00000396625 Q96MF0 132 aa8.09□□□□□ -1.11
COL4A4-201ENST00000396625 CCL18P55774 89 aa8.09□□□□□ -1.11
COL4A4-201ENST00000396625 GATA1P15976 413 aaPredicted RBP8.09□□□□□ -1.11
COL4A4-201ENST00000396625 Q8TCH9 128 aa8.09□□□□□ -1.11
COL4A4-201ENST00000396625 COX7BP24311 80 aa8.08□□□□□ -1.12
COL4A4-201ENST00000396625 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
COL4A4-201ENST00000396625 RPL39P62891 51 aaKnown RBP8.08□□□□□ -1.12
COL4A4-201ENST00000396625 TDRG1Q3Y452 100 aa8.08□□□□□ -1.12
COL4A4-201ENST00000396625 TOMM6Q96B49 74 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms