RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ANKRD17O75179 2603 aaKnown RBP10.02□□□□□ -0.81
TRIM40-207ENST00000396581 TRAV41A0A0B4J266 112 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 NPFFO15130 113 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 APOMO95445 188 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 TSPAN13O95857 204 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 ARL3P36405 182 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 TCTEX1D4Q5JR98 221 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 HELZ2Q9BYK8 2649 aaKnown RBP10.01□□□□□ -0.81
TRIM40-207ENST00000396581 A0A1B0GV72 72 aa10.01□□□□□ -0.81
TRIM40-207ENST00000396581 SCGB2A2Q13296 93 aa10.01□□□□□ -0.81
TRIM40-207ENST00000396581 UNQ9165/PRO28630Q6UXU0 137 aa10.01□□□□□ -0.81
TRIM40-207ENST00000396581 A0A0J9YY99 117 aa10□□□□□ -0.81
TRIM40-207ENST00000396581 SPRY2O43597 315 aa10□□□□□ -0.81
TRIM40-207ENST00000396581 DUSP14O95147 198 aaKnown RBP10□□□□□ -0.81
TRIM40-207ENST00000396581 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
TRIM40-207ENST00000396581 SCGB1D4Q6XE38 83 aa10□□□□□ -0.81
TRIM40-207ENST00000396581 MOB4Q9Y3A3 225 aa10□□□□□ -0.81
TRIM40-207ENST00000396581 C11orf86A6NJI1 115 aa10□□□□□ -0.81
TRIM40-207ENST00000396581 MGPP08493 103 aa10□□□□□ -0.81
TRIM40-207ENST00000396581 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
TRIM40-207ENST00000396581 J3KRW8 73 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 GNRH2O43555 120 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 HERVK_113P61574 105 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM40-207ENST00000396581 NDUFA11Q86Y39 141 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 TIMM17AQ99595 171 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
TRIM40-207ENST00000396581 PMVKQ15126 192 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 LYRM7Q5U5X0 104 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 KLHL30-AS1Q8NEE0 82 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 DOPEY2Q9Y3R5 2298 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 CSMD1Q96PZ7 3565 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 KLLNB2CW77 178 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 RNASE4P34096 147 aaKnown RBP9.98□□□□□ -0.81
TRIM40-207ENST00000396581 ZFP2Q6ZN57 461 aa9.98□□□□□ -0.81
TRIM40-207ENST00000396581 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRIM40-207ENST00000396581 H3BUA1 57 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 TRBV12-3P01733 135 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 IGHV3-30P01768 117 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 IGHV3-30-5P0DP03 117 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 PLA2G2AP14555 144 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 TP53TG1Q9Y2A0 90 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 TRBV20-1A0A075B6N2 111 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 TRBV6-5A0A0K0K1A5 114 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 MSMBP08118 114 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 DEFB1P60022 68 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 USMG5Q96IX5 58 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 AMELXQ99217 191 aa9.97□□□□□ -0.81
TRIM40-207ENST00000396581 B4DSR2 109 aa9.96□□□□□ -0.81
TRIM40-207ENST00000396581 J3QKU1 62 aa9.96□□□□□ -0.81
TRIM40-207ENST00000396581 VCYO14598 125 aa9.96□□□□□ -0.81
TRIM40-207ENST00000396581 ZNF876PQ49A33 203 aa9.96□□□□□ -0.81
TRIM40-207ENST00000396581 SYT8Q8NBV8 401 aa9.96□□□□□ -0.81
TRIM40-207ENST00000396581 APCP25054 2843 aa9.96□□□□□ -0.82
TRIM40-207ENST00000396581 A0A096LNT2 108 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 CFC1P0CG37 223 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 PSMB2P49721 201 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 TRBV27A0A0K0K1C4 114 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 F6UB75 175 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 LGALS9O00182 355 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 TSPEAR-AS2P59090 65 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 FHL3Q13643 280 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 TEN1Q86WV5 123 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 C10orf126Q8N4M7 172 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 PPDPFLQ8WWR9 84 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 VCX2Q9H322 139 aa9.95□□□□□ -0.82
TRIM40-207ENST00000396581 BEX4Q9NWD9 120 aaPredicted RBP9.95□□□□□ -0.82
TRIM40-207ENST00000396581 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 TCL1BO95988 128 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 IGHV1-69P01742 117 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 Q6ZS46 218 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 ZNRF2Q8NHG8 242 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 KIR2DL4Q99706 377 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 LINC00527Q9UJ94 153 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 CREBBPQ92793 2442 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 CSPG4Q6UVK1 2322 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 M0QXV9 152 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 GATA3P23771 443 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 CRYBA4P53673 196 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 LRRC75A-AS1Q8N1F1 130 aa9.94□□□□□ -0.82
TRIM40-207ENST00000396581 CKS1BP61024 79 aa9.93□□□□□ -0.82
TRIM40-207ENST00000396581 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
TRIM40-207ENST00000396581 DEFB113Q30KQ7 82 aa9.93□□□□□ -0.82
TRIM40-207ENST00000396581 ZNF418Q8TF45 676 aaPredicted RBP9.93□□□□□ -0.82
TRIM40-207ENST00000396581 MUC4Q99102 2169 aa9.93□□□□□ -0.82
TRIM40-207ENST00000396581 IGHG2P01859 326 aa9.92□□□□□ -0.82
TRIM40-207ENST00000396581 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
TRIM40-207ENST00000396581 CELSR1Q9NYQ6 3014 aa9.92□□□□□ -0.82
TRIM40-207ENST00000396581 SDHAF1A6NFY7 115 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms