RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 C15orf53Q8NAA6 179 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 GAGE7O76087 117 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 CRYBA4P53673 196 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 NTF3P20783 257 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 RIGQ13278 110 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 PHLDA1Q8WV24 401 aaPredicted RBP9.3□□□□□ -0.92
USP44-202ENST00000393091 STARD9Q9P2P6 4700 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 NBEAL2Q6ZNJ1 2754 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
USP44-202ENST00000393091 S100A8P05109 93 aa9.29□□□□□ -0.92
USP44-202ENST00000393091 OR4C5Q8NGB2 326 aa9.29□□□□□ -0.92
USP44-202ENST00000393091 PRO0255Q9UI72 69 aa9.29□□□□□ -0.92
USP44-202ENST00000393091 SPANXN1Q5VSR9 72 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 ZNF479Q96JC4 524 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 DPH3P1Q9H4G8 78 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 DEFB131BA0A096LNP1 70 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 EMP1P54849 157 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 COX19Q49B96 90 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 SH2D6Q7Z4S9 175 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 M0R381 172 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 BORCS7Q96B45 105 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 APLNQ9ULZ1 77 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 KLK5Q9Y337 293 aaPredicted RBP9.28□□□□□ -0.92
USP44-202ENST00000393091 LYSTQ99698 3801 aa9.28□□□□□ -0.92
USP44-202ENST00000393091 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
USP44-202ENST00000393091 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.93
USP44-202ENST00000393091 DNAJC30Q96LL9 226 aa9.27□□□□□ -0.93
USP44-202ENST00000393091 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
USP44-202ENST00000393091 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 VPS13DQ5THJ4 4388 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 FAM3BP58499 235 aaPredicted RBP9.26□□□□□ -0.93
USP44-202ENST00000393091 SAMD10Q9BYL1 202 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 HBBP68871 147 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 RNF185Q96GF1 192 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
USP44-202ENST00000393091 PRSS47A8MTI9 375 aa9.25□□□□□ -0.93
USP44-202ENST00000393091 APOC3P02656 99 aa9.25□□□□□ -0.93
USP44-202ENST00000393091 RHOHQ15669 191 aa9.25□□□□□ -0.93
USP44-202ENST00000393091 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
USP44-202ENST00000393091 MSRB1Q9NZV6 116 aa9.25□□□□□ -0.93
USP44-202ENST00000393091 TRBV6-5A0A0K0K1A5 114 aa9.25□□□□□ -0.93
USP44-202ENST00000393091 K7EQD1 137 aa9.25□□□□□ -0.93
USP44-202ENST00000393091 RPL32P62910 135 aaKnown RBP9.25□□□□□ -0.93
USP44-202ENST00000393091 JPT2Q9H910 190 aa9.24□□□□□ -0.93
USP44-202ENST00000393091 PLECQ15149 4684 aaKnown RBP9.24□□□□□ -0.93
USP44-202ENST00000393091 TWIST1Q15672 202 aa9.24□□□□□ -0.93
USP44-202ENST00000393091 M0QY20 66 aa9.24□□□□□ -0.93
USP44-202ENST00000393091 Q6ZSN1 163 aa9.24□□□□□ -0.93
USP44-202ENST00000393091 PHOX2AO14813 284 aa9.23□□□□□ -0.93
USP44-202ENST00000393091 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
USP44-202ENST00000393091 SLC25A29Q8N8R3 303 aa9.23□□□□□ -0.93
USP44-202ENST00000393091 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
USP44-202ENST00000393091 S100A1P23297 94 aa9.23□□□□□ -0.93
USP44-202ENST00000393091 ELOBQ15370 118 aa9.23□□□□□ -0.93
USP44-202ENST00000393091 H7C1H1 209 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 RAB4AP20338 218 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 S100PP25815 95 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 TMEM88Q6PEY1 159 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 SMIM15Q7Z3B0 74 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 RPS10P5Q9NQ39 176 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 EVI2AP22794 236 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 UPK3BQ9BT76 320 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 STAB2Q8WWQ8 2551 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 TRGV4A0A0C4DH28 118 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 PPP1R17O96001 155 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 C14orf178Q8N769 122 aaPredicted RBP9.22□□□□□ -0.93
USP44-202ENST00000393091 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
USP44-202ENST00000393091 A0A096LPF7 62 aa9.21□□□□□ -0.93
USP44-202ENST00000393091 SMIM17P0DL12 118 aa9.21□□□□□ -0.93
USP44-202ENST00000393091 ATRAIDQ6UW56 229 aa9.21□□□□□ -0.93
USP44-202ENST00000393091 F5H768 121 aa9.21□□□□□ -0.94
USP44-202ENST00000393091 PPBPP02775 128 aa9.21□□□□□ -0.94
USP44-202ENST00000393091 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.94
USP44-202ENST00000393091 TMEM136Q6ZRR5 245 aa9.21□□□□□ -0.94
USP44-202ENST00000393091 SMCO4Q9NRQ5 59 aa9.21□□□□□ -0.94
USP44-202ENST00000393091 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.94
USP44-202ENST00000393091 PAX4O43316 350 aa9.2□□□□□ -0.94
USP44-202ENST00000393091 MT-ND6P03923 174 aa9.2□□□□□ -0.94
USP44-202ENST00000393091 MRPL23Q16540 153 aaKnown RBP9.2□□□□□ -0.94
USP44-202ENST00000393091 UBE2D3P61077 147 aa9.2□□□□□ -0.94
USP44-202ENST00000393091 UBE2D2P62837 147 aa9.2□□□□□ -0.94
USP44-202ENST00000393091 GTSF1LQ9H1H1 148 aa9.2□□□□□ -0.94
USP44-202ENST00000393091 A0A087WWL8 130 aa9.19□□□□□ -0.94
USP44-202ENST00000393091 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
USP44-202ENST00000393091 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
USP44-202ENST00000393091 TPPP3Q9BW30 176 aa9.19□□□□□ -0.94
USP44-202ENST00000393091 NIT2Q9NQR4 276 aa9.19□□□□□ -0.94
USP44-202ENST00000393091 HLA-DQA1P01909 254 aa9.18□□□□□ -0.94
USP44-202ENST00000393091 LGALS9CQ6DKI2 356 aa9.18□□□□□ -0.94
USP44-202ENST00000393091 NRACQ8N912 160 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms