RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CCDC179H3BU77 68 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 M0R2P5 195 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 TFF1P04155 84 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 HSD11B1P28845 292 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 HSD17B12Q53GQ0 312 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 C20orf197Q8N268 126 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 DYNLRB2Q8TF09 96 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 SLC35B3Q9H1N7 401 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 METTL1Q9UBP6 276 aaKnown RBP-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 STOML2Q9UJZ1 356 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 FAM135BQ49AJ0 1406 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 A2MP01023 1474 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 ANKRD31Q8N7Z5 1873 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 LRP5O75197 1615 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 CAMSAP1Q5T5Y3 1602 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 LAMB1P07942 1786 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 CHD8Q9HCK8 2581 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 FXYD6-FXYD2A0A087WZ82 144 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 E7EQ34 232 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 YPEL1O60688 119 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 SLC25A6P12236 298 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 RPL22P35268 128 aaKnown RBP-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 CRYBA4P53673 196 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 SPCS2Q15005 226 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 DCUN1D2Q6PH85 259 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 SMIM20Q8N5G0 67 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 IFI27L1Q96BM0 104 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 NDUFAF1Q9Y375 327 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 PRKDCP78527 4128 aaKnown RBP-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 NUP210Q8TEM1 1887 aaPredicted RBP-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 BCL9LQ86UU0 1499 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 KIDINS220Q9ULH0 1771 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 MYH2Q9UKX2 1941 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 LAMA5O15230 3695 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 LOC107984640A0A0U1RRK4 108 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 A0A1B0GW64 132 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 M0QZK8 103 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 ZNF609O15014 1411 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 SERPINB1P30740 379 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 C10orf71Q711Q0 1435 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 SNX29P2Q8IUI4 249 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 NPVFQ9HCQ7 196 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 CBLN4Q9NTU7 201 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 NOP16Q9Y3C1 178 aaKnown RBP-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 MED31Q9Y3C7 131 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 USF3Q68DE3 2245 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 FLGP20930 4061 aaPredicted RBP-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 MYH1P12882 1939 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 ARHGAP31Q2M1Z3 1444 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 TRAV1-2A0A0B4J238 106 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 FAM92AA1XBS5 289 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 G3V318 75 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 RBP4P02753 201 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 EDDM3BP56851 147 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 KRTAP20-2Q3LI61 65 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 Q5VV11 94 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 STX12Q86Y82 276 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 ATP6V0E2Q8NHE4 81 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 SCN3BQ9NY72 215 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 CALML5Q9NZT1 146 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 GOLGA3Q08378 1498 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 ZNF142P52746 1687 aaPredicted RBP-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 KIAA0100Q14667 2235 aaKnown RBP-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 MYO7BQ6PIF6 2116 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 TRAV12-3A0A0B4J271 114 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 H0YJX3 145 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 SPINK4O60575 86 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 SMIM24O75264 130 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 SLC25A5P05141 298 aaKnown RBP-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 PIGYQ3MUY2 71 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 BAGE3Q86Y29 109 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 MAGOHBQ96A72 148 aaKnown RBP-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 CHMP6Q96FZ7 201 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 TP53AIP1Q9HCN2 124 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 TRAPPC2LQ9UL33 140 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 UHRF1BP1LA0JNW5 1464 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 URB1O60287 2271 aaKnown RBP-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 AKAP11Q9UKA4 1901 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 PLXNA1Q9UIW2 1896 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 ARAP1Q96P48 1450 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 J3QLW9 94 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 M0R2T5 61 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 TCRAP04437 139 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 NPC2P61916 151 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 CFAP126Q5VTH2 177 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 SPAG11AQ6PDA7 123 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 HRCT1Q6UXD1 115 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 THEM6Q8WUY1 208 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 WFDC6Q9BQY6 131 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 BOLA2Q9H3K6 86 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 ATPIF1Q9UII2 106 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 WDR97A6NE52 1622 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 MED23Q9ULK4 1368 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 KIF13AQ9H1H9 1805 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 TRBV6-1A0A0K0K1D8 114 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 A6NIN4 97 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 IFNA17P01571 189 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 RBM3P98179 157 aaKnown RBP-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 TRIQKQ629K1 86 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms