RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PIRTP0C851 137 aa0.78□□□□□ -2.28
RNU6-40P-201ENST00000384254 COPZ1P61923 177 aa0.78□□□□□ -2.28
RNU6-40P-201ENST00000384254 C4orf33Q8N1A6 199 aa0.78□□□□□ -2.28
RNU6-40P-201ENST00000384254 TCEAL4Q96EI5 215 aa0.78□□□□□ -2.28
RNU6-40P-201ENST00000384254 PTPRMP28827 1452 aa0.78□□□□□ -2.28
RNU6-40P-201ENST00000384254 ABCA1O95477 2261 aa0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 PIPP12273 146 aaPredicted RBP0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 CCL3L1P16619 93 aa0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 NPC2P61916 151 aa0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 SLC48A1Q6P1K1 146 aa0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 Q6ZUT4 128 aa0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 RPRMQ9NS64 109 aa0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 PAIP2BQ9ULR5 123 aaKnown RBP0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 NAV3Q8IVL0 2385 aa0.77□□□□□ -2.29
RNU6-40P-201ENST00000384254 GUCA1AP43080 201 aaPredicted RBP0.76□□□□□ -2.29
RNU6-40P-201ENST00000384254 RPS25P62851 125 aaKnown RBP0.76□□□□□ -2.29
RNU6-40P-201ENST00000384254 SPINK6Q6UWN8 80 aa0.76□□□□□ -2.29
RNU6-40P-201ENST00000384254 C20orf197Q8N268 126 aa0.76□□□□□ -2.29
RNU6-40P-201ENST00000384254 COX7B2Q8TF08 81 aa0.76□□□□□ -2.29
RNU6-40P-201ENST00000384254 BPESC1Q9GZL8 116 aa0.76□□□□□ -2.29
RNU6-40P-201ENST00000384254 IL5P05113 134 aa0.75□□□□□ -2.29
RNU6-40P-201ENST00000384254 VMO1Q7Z5L0 202 aa0.75□□□□□ -2.29
RNU6-40P-201ENST00000384254 KCNRGQ8N5I3 272 aa0.75□□□□□ -2.29
RNU6-40P-201ENST00000384254 TMEM242Q9NWH2 141 aa0.75□□□□□ -2.29
RNU6-40P-201ENST00000384254 V9GYV3 84 aa0.75□□□□□ -2.29
RNU6-40P-201ENST00000384254 IFNA17P01571 189 aa0.73□□□□□ -2.29
RNU6-40P-201ENST00000384254 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
RNU6-40P-201ENST00000384254 C9orf116Q5BN46 136 aaPredicted RBP0.73□□□□□ -2.29
RNU6-40P-201ENST00000384254 SPTSSAQ969W0 71 aa0.73□□□□□ -2.29
RNU6-40P-201ENST00000384254 SOGA1O94964 1423 aa0.72□□□□□ -2.29
RNU6-40P-201ENST00000384254 TMEM2Q9UHN6 1383 aa0.72□□□□□ -2.29
RNU6-40P-201ENST00000384254 TRBV7-1A0A0A6YYK4 115 aa0.72□□□□□ -2.29
RNU6-40P-201ENST00000384254 SNCGO76070 127 aa0.72□□□□□ -2.29
RNU6-40P-201ENST00000384254 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
RNU6-40P-201ENST00000384254 TNCP24821 2201 aa0.72□□□□□ -2.29
RNU6-40P-201ENST00000384254 MED13LQ71F56 2210 aa0.72□□□□□ -2.29
RNU6-40P-201ENST00000384254 PLXNA1Q9UIW2 1896 aa0.71□□□□□ -2.3
RNU6-40P-201ENST00000384254 MEGF8Q7Z7M0 2845 aa0.71□□□□□ -2.3
RNU6-40P-201ENST00000384254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.71□□□□□ -2.3
RNU6-40P-201ENST00000384254 SMIM11BQ8TCY0 68 aa0.71□□□□□ -2.3
RNU6-40P-201ENST00000384254 FRAS1Q86XX4 4008 aa0.71□□□□□ -2.3
RNU6-40P-201ENST00000384254 CACNA1EQ15878 2313 aa0.71□□□□□ -2.3
RNU6-40P-201ENST00000384254 USP24Q9UPU5 2620 aa0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 CDK13Q14004 1512 aaKnown RBP0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 TNS1Q9HBL0 1735 aaKnown RBP0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 APODP05090 189 aa0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 UBE2G1P62253 170 aa0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 CCDC167Q9P0B6 97 aa0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 DAPK1P53355 1430 aa0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 ADGRB1O14514 1584 aa0.7□□□□□ -2.3
RNU6-40P-201ENST00000384254 PARP14Q460N5 1801 aa0.69□□□□□ -2.3
RNU6-40P-201ENST00000384254 PITX3O75364 302 aa0.69□□□□□ -2.3
RNU6-40P-201ENST00000384254 NDUFB6O95139 128 aa0.69□□□□□ -2.3
RNU6-40P-201ENST00000384254 CCDC58Q4VC31 144 aa0.69□□□□□ -2.3
RNU6-40P-201ENST00000384254 PROK2Q9HC23 129 aa0.69□□□□□ -2.3
RNU6-40P-201ENST00000384254 SCP2D1Q9UJQ7 156 aa0.69□□□□□ -2.3
RNU6-40P-201ENST00000384254 NRXN2Q9P2S2 1712 aa0.69□□□□□ -2.3
RNU6-40P-201ENST00000384254 PHIPQ8WWQ0 1821 aa0.68□□□□□ -2.3
RNU6-40P-201ENST00000384254 KIAA0100Q14667 2235 aaKnown RBP0.68□□□□□ -2.3
RNU6-40P-201ENST00000384254 A0A087WTM6 91 aa0.68□□□□□ -2.3
RNU6-40P-201ENST00000384254 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
RNU6-40P-201ENST00000384254 S100A12P80511 92 aa0.68□□□□□ -2.3
RNU6-40P-201ENST00000384254 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
RNU6-40P-201ENST00000384254 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
RNU6-40P-201ENST00000384254 GVQW2A0A096LPI5 108 aaPredicted RBP0.67□□□□□ -2.3
RNU6-40P-201ENST00000384254 ACYP2P14621 99 aa0.67□□□□□ -2.3
RNU6-40P-201ENST00000384254 CBLN1P23435 193 aa0.67□□□□□ -2.3
RNU6-40P-201ENST00000384254 ARPC4P59998 168 aa0.67□□□□□ -2.3
RNU6-40P-201ENST00000384254 LAMB1P07942 1786 aa0.67□□□□□ -2.3
RNU6-40P-201ENST00000384254 AKAP11Q9UKA4 1901 aa0.66□□□□□ -2.3
RNU6-40P-201ENST00000384254 C10orf82Q8WW14 230 aa0.66□□□□□ -2.3
RNU6-40P-201ENST00000384254 MUC22E2RYF6 1773 aaPredicted RBP0.65□□□□□ -2.3
RNU6-40P-201ENST00000384254 SPTSSBQ8NFR3 76 aa0.65□□□□□ -2.31
RNU6-40P-201ENST00000384254 SDF2Q99470 211 aa0.65□□□□□ -2.31
RNU6-40P-201ENST00000384254 LAMC3Q9Y6N6 1575 aa0.65□□□□□ -2.31
RNU6-40P-201ENST00000384254 F5P12259 2224 aa0.65□□□□□ -2.31
RNU6-40P-201ENST00000384254 EDDM3BP56851 147 aa0.64□□□□□ -2.31
RNU6-40P-201ENST00000384254 COPS9Q8WXC6 57 aa0.64□□□□□ -2.31
RNU6-40P-201ENST00000384254 Q96NJ1 140 aa0.64□□□□□ -2.31
RNU6-40P-201ENST00000384254 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
RNU6-40P-201ENST00000384254 KDM6BO15054 1643 aa0.64□□□□□ -2.31
RNU6-40P-201ENST00000384254 PIGBOS1A0A0B4J2F0 54 aa0.63□□□□□ -2.31
RNU6-40P-201ENST00000384254 UBE2D1P51668 147 aa0.63□□□□□ -2.31
RNU6-40P-201ENST00000384254 S100A7L2Q5SY68 101 aa0.63□□□□□ -2.31
RNU6-40P-201ENST00000384254 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 FAM92AA1XBS5 289 aa0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 SMIM6P0DI80 62 aa0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 COX6A2Q02221 97 aa0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 ZNF818PQ6ZRF7 136 aa0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 DPH3Q96FX2 82 aa0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 TSC22D3Q99576 134 aa0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 JMJD1CQ15652 2540 aa0.62□□□□□ -2.31
RNU6-40P-201ENST00000384254 SPEF2Q9C093 1822 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 IBTKQ9P2D0 1353 aaPredicted RBP0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 TRGV1A0A0A0MS02 117 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 TMEM14DPA8MWL7 114 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 FAM25AB3EWG3 89 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 FAM25CB3EWG5 89 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 FAM25GB3EWG6 89 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 APOC4-APOC2K7ER74 178 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms