RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 BPESC1Q9GZL8 116 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 GFRA4Q9GZZ7 299 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 ZNF492Q9P255 531 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 HRNRQ86YZ3 2850 aaPredicted RBP3.43□□□□□ -1.86
CDR1-201ENST00000370532 NF1P21359 2839 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.43□□□□□ -1.86
CDR1-201ENST00000370532 CRYBG3Q68DQ2 2970 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 IGKV1OR2-108A0A075B7D4 117 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 DPM2O94777 84 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 PRSS1P07477 247 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 RNASE1P07998 156 aaKnown RBP3.43□□□□□ -1.86
CDR1-201ENST00000370532 PRDX2P32119 198 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 LMO4P61968 165 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 NDUFA11Q86Y39 141 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 FAM90A1Q86YD7 464 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 PLEKHB2Q96CS7 222 aa3.43□□□□□ -1.86
CDR1-201ENST00000370532 MRPL35Q9NZE8 188 aaKnown RBP3.43□□□□□ -1.86
CDR1-201ENST00000370532 ANK3Q12955 4377 aaKnown RBP3.42□□□□□ -1.86
CDR1-201ENST00000370532 AKAP6Q13023 2319 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 OOEPA6NGQ2 149 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 TMEM178BH3BS89 294 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 TRACP01848 142 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 RPL13AP40429 203 aaKnown RBP3.42□□□□□ -1.86
CDR1-201ENST00000370532 EIF4EBP1Q13541 118 aaPredicted RBP3.42□□□□□ -1.86
CDR1-201ENST00000370532 FAM201AQ5SY85 155 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 LINC01561Q8N1V8 128 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 IGKV1D-17A0A075B6S4 117 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 TRAV3A0A0B4J244 114 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 A0A0U1RRA0 63 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 A0A1B0GUT8 65 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 LINC00473A8K010 186 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 LINC01619G3V211 115 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 H3BMM0 161 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 NBR2O15453 112 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 NDUFA3O95167 84 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 CFC1BP0CG36 223 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 CFC1P0CG37 223 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 PRB4P10163 310 aaPredicted RBP3.42□□□□□ -1.86
CDR1-201ENST00000370532 ZNF134P52741 427 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 C1orf195Q5TG92 126 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 LYRM7Q5U5X0 104 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 VKORC1L1Q8N0U8 176 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 CD177Q8N6Q3 437 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 DEFB108BQ8NET1 73 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 SMCR5Q8TEV8 140 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 UBE2WQ96B02 151 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 C9orf85Q96MD7 179 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 MRPL20Q9BYC9 149 aaKnown RBP3.42□□□□□ -1.86
CDR1-201ENST00000370532 SLC25A39Q9BZJ4 359 aaPredicted RBP3.42□□□□□ -1.86
CDR1-201ENST00000370532 NXT2Q9NPJ8 142 aaKnown RBP3.42□□□□□ -1.86
CDR1-201ENST00000370532 CTSZQ9UBR2 303 aa3.42□□□□□ -1.86
CDR1-201ENST00000370532 DCHS2Q6V1P9 2916 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 ZNF785A8K8V0 405 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 GAS8-AS1O95177 125 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 TFF1P04155 84 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 LEPP41159 167 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 TMEM258P61165 79 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 HERVK_113P61574 105 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 RPL11P62913 178 aaKnown RBP3.41□□□□□ -1.86
CDR1-201ENST00000370532 TWIST1Q15672 202 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 LINC00311Q8N616 119 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 ZNRF1Q8ND25 227 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 U3KQK5 164 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 FBN3Q75N90 2809 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 TRAV13-1A0A0B4J241 112 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 NCBP2LA6PVI3 153 aaKnown RBP3.41□□□□□ -1.86
CDR1-201ENST00000370532 LYNX1G3V0Z9 82 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 LYNX1P0DP58 116 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 MLANAQ16655 118 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 MRPL51Q4U2R6 128 aaKnown RBP3.41□□□□□ -1.86
CDR1-201ENST00000370532 ZNF497Q6ZNH5 498 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 MYOZ3Q8TDC0 251 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 CCL13Q99616 98 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 SHANK2-AS3Q9BTD1 123 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 SPANXCQ9NY87 97 aa3.41□□□□□ -1.86
CDR1-201ENST00000370532 VPS13CQ709C8 3753 aa3.4□□□□□ -1.86
CDR1-201ENST00000370532 ABCA1O95477 2261 aa3.4□□□□□ -1.86
CDR1-201ENST00000370532 LY6HO94772 140 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 HLA-DMBP28068 263 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 DUTP33316 252 aaKnown RBP3.4□□□□□ -1.87
CDR1-201ENST00000370532 RIGQ13278 110 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 SLC25A48Q6ZT89 311 aaKnown RBP3.4□□□□□ -1.87
CDR1-201ENST00000370532 ORMDL3Q8N138 153 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 LINC00482Q8N8I6 264 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 C8orf31Q8N9H6 132 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 SRSF12Q8WXF0 261 aaKnown RBP3.4□□□□□ -1.87
CDR1-201ENST00000370532 UPK3BQ9BT76 320 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 DPH3P1Q9H4G8 78 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
CDR1-201ENST00000370532 X6R8D5 127 aa3.4□□□□□ -1.87
CDR1-201ENST00000370532 TMEM30CPA0ZSE6 113 aa3.39□□□□□ -1.87
CDR1-201ENST00000370532 H3BTX0 84 aa3.39□□□□□ -1.87
CDR1-201ENST00000370532 ERVK-16P61578 105 aa3.39□□□□□ -1.87
CDR1-201ENST00000370532 EEF1AKMT3Q96AZ1 226 aa3.39□□□□□ -1.87
CDR1-201ENST00000370532 FXYD5Q96DB9 178 aa3.39□□□□□ -1.87
CDR1-201ENST00000370532 C17orf77Q96MU5 243 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms