RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 BCL2P10415 239 aa13.88□□□□□ -0.19
SMNDC1-201ENST00000369592 ZFP82Q8N141 532 aa13.88□□□□□ -0.19
SMNDC1-201ENST00000369592 GTSF1LQ9H1H1 148 aa13.88□□□□□ -0.19
SMNDC1-201ENST00000369592 TRBV20OR9-2A0A075B6H5 130 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 TRAV9-2A0A087WT02 112 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 A0A1B0GVG6 124 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 OR5AL1P0C617 328 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 CENPWQ5EE01 88 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 LINC01556Q5JQF7 62 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 LELP1Q5T871 98 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 ATP6V0E2Q8NHE4 81 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 SMIM12Q96EX1 92 aa13.87□□□□□ -0.19
SMNDC1-201ENST00000369592 IGHV3-38A0A0C4DH36 116 aa13.86□□□□□ -0.19
SMNDC1-201ENST00000369592 C19orf71A6NCJ1 209 aa13.86□□□□□ -0.19
SMNDC1-201ENST00000369592 M0R381 172 aa13.86□□□□□ -0.19
SMNDC1-201ENST00000369592 PDE6DO43924 150 aa13.86□□□□□ -0.19
SMNDC1-201ENST00000369592 EVI2AP22794 236 aa13.86□□□□□ -0.19
SMNDC1-201ENST00000369592 OR10AG1Q8NH19 301 aa13.86□□□□□ -0.19
SMNDC1-201ENST00000369592 LYPD6BQ8NI32 183 aa13.86□□□□□ -0.19
SMNDC1-201ENST00000369592 RAB19A4D1S5 217 aa13.85□□□□□ -0.19
SMNDC1-201ENST00000369592 MSRB1Q9NZV6 116 aa13.85□□□□□ -0.19
SMNDC1-201ENST00000369592 VAX2Q9UIW0 290 aa13.85□□□□□ -0.19
SMNDC1-201ENST00000369592 A0A087WWL8 130 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 GAGE12JA6NER3 117 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 IFNA1P01562 189 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 KRTAP10-2P60368 255 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 GAGE1Q13065 139 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 GAGE4Q13068 117 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 GAGE5Q13069 117 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 GAGE13Q4V321 117 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 PRR27Q6MZM9 219 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 NFE4Q86UQ8 179 aa13.84□□□□□ -0.19
SMNDC1-201ENST00000369592 HSPG2P98160 4391 aa13.83□□□□□ -0.2
SMNDC1-201ENST00000369592 TAGLN2P37802 199 aaKnown RBP13.83□□□□□ -0.2
SMNDC1-201ENST00000369592 SPATA12Q7Z6I5 190 aa13.83□□□□□ -0.2
SMNDC1-201ENST00000369592 C10orf126Q8N4M7 172 aa13.83□□□□□ -0.2
SMNDC1-201ENST00000369592 TRAV8-6A0A0B4J262 113 aa13.82□□□□□ -0.2
SMNDC1-201ENST00000369592 IGLC6P0CF74 106 aa13.82□□□□□ -0.2
SMNDC1-201ENST00000369592 FAM74A4Q5TZK3 123 aa13.82□□□□□ -0.2
SMNDC1-201ENST00000369592 ALKAL2Q6UX46 152 aa13.82□□□□□ -0.2
SMNDC1-201ENST00000369592 TRBV10-1A0A0K0K1A3 114 aa13.81□□□□□ -0.2
SMNDC1-201ENST00000369592 C16orf90A8MZG2 172 aa13.81□□□□□ -0.2
SMNDC1-201ENST00000369592 IBA57-AS1B1ANH7 110 aa13.81□□□□□ -0.2
SMNDC1-201ENST00000369592 GNG4P50150 75 aa13.81□□□□□ -0.2
SMNDC1-201ENST00000369592 OR10J3Q5JRS4 329 aa13.81□□□□□ -0.2
SMNDC1-201ENST00000369592 MED9Q9NWA0 146 aa13.81□□□□□ -0.2
SMNDC1-201ENST00000369592 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
SMNDC1-201ENST00000369592 OR10G8Q8NGN5 311 aa13.8□□□□□ -0.2
SMNDC1-201ENST00000369592 APOBP04114 4563 aaKnown RBP13.8□□□□□ -0.2
SMNDC1-201ENST00000369592 NKX2-5P52952 324 aaPredicted RBP13.79□□□□□ -0.2
SMNDC1-201ENST00000369592 RAB4BP61018 213 aa13.79□□□□□ -0.2
SMNDC1-201ENST00000369592 BLOC1S1P78537 153 aa13.79□□□□□ -0.2
SMNDC1-201ENST00000369592 A0A087WTM6 91 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 A0A087WWC5 75 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 MUC21A0A0G2JKD1 596 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 MUC21A0A140T8X8 626 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 GZMBP10144 247 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 RPS20P60866 119 aaKnown RBP13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 UBE2D3P61077 147 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 UBE2D2P62837 147 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 Q8N3U1 123 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 OR2D3Q8NGH3 330 aa13.77□□□□□ -0.21
SMNDC1-201ENST00000369592 CDK2AP2O75956 126 aa13.76□□□□□ -0.21
SMNDC1-201ENST00000369592 SPANXN1Q5VSR9 72 aa13.76□□□□□ -0.21
SMNDC1-201ENST00000369592 HERC1Q15751 4861 aa13.76□□□□□ -0.21
SMNDC1-201ENST00000369592 TRBV7-3A0A075B6L6 115 aa13.75□□□□□ -0.21
SMNDC1-201ENST00000369592 RBFOX3A6NFN3 312 aa13.75□□□□□ -0.21
SMNDC1-201ENST00000369592 TMEM250H0YL14 139 aa13.75□□□□□ -0.21
SMNDC1-201ENST00000369592 LAGE3Q14657 143 aa13.75□□□□□ -0.21
SMNDC1-201ENST00000369592 FER1L6-AS1Q8NA97 138 aa13.75□□□□□ -0.21
SMNDC1-201ENST00000369592 DAZAP1Q96EP5 407 aaKnown RBP13.75□□□□□ -0.21
SMNDC1-201ENST00000369592 BIN3Q9NQY0 253 aa13.75□□□□□ -0.21
SMNDC1-201ENST00000369592 K7EN84 100 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 IGHV3-30P01768 117 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 IGHV3-33P01772 117 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 IGHV3-30-3P0DP02 117 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 IGHV3-30-5P0DP03 117 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 ERVFC1-1P60608 527 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 NEXN-AS1Q8NBZ9 246 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 NUDT10Q8NFP7 164 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 OCC1Q8TAD7 63 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
SMNDC1-201ENST00000369592 LRCOL1A6NCL2 159 aa13.73□□□□□ -0.21
SMNDC1-201ENST00000369592 NDUFS6O75380 124 aaKnown RBP13.73□□□□□ -0.21
SMNDC1-201ENST00000369592 P01737 135 aa13.73□□□□□ -0.21
SMNDC1-201ENST00000369592 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
SMNDC1-201ENST00000369592 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
SMNDC1-201ENST00000369592 NIT1Q86X76 327 aa13.72□□□□□ -0.21
SMNDC1-201ENST00000369592 PGPEP1Q9NXJ5 209 aa13.72□□□□□ -0.21
SMNDC1-201ENST00000369592 F2Z2F3 143 aa13.71□□□□□ -0.21
SMNDC1-201ENST00000369592 CACNG7P62955 275 aa13.71□□□□□ -0.21
SMNDC1-201ENST00000369592 ZNF56Q15929 161 aa13.71□□□□□ -0.21
SMNDC1-201ENST00000369592 AP1S3Q96PC3 154 aa13.71□□□□□ -0.21
SMNDC1-201ENST00000369592 CNFNQ9BYD5 112 aa13.71□□□□□ -0.21
SMNDC1-201ENST00000369592 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
SMNDC1-201ENST00000369592 CTRLP40313 264 aa13.7□□□□□ -0.22
SMNDC1-201ENST00000369592 CDPF1Q6NVV7 123 aa13.7□□□□□ -0.22
SMNDC1-201ENST00000369592 WDR73Q6P4I2 378 aa13.7□□□□□ -0.22
SMNDC1-201ENST00000369592 DAZ4Q86SG3 579 aaKnown RBP13.7□□□□□ -0.22
SMNDC1-201ENST00000369592 DAZ3Q9NR90 486 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms