RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 IGKV4-1P06312 121 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 SMIM20Q8N5G0 67 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
NUCKS1-201ENST00000367142 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
NUCKS1-201ENST00000367142 ATOX1O00244 68 aa12.04□□□□□ -0.48
NUCKS1-201ENST00000367142 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
NUCKS1-201ENST00000367142 CASC2Q6XLA1 102 aa12.04□□□□□ -0.48
NUCKS1-201ENST00000367142 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
NUCKS1-201ENST00000367142 CACNA1BQ00975 2339 aa12.04□□□□□ -0.48
NUCKS1-201ENST00000367142 TMEM256-PLSCR3K7ERE1 68 aa12.04□□□□□ -0.48
NUCKS1-201ENST00000367142 TRBV10-1A0A0K0K1A3 114 aa12.03□□□□□ -0.48
NUCKS1-201ENST00000367142 ABCA4P78363 2273 aa12.03□□□□□ -0.48
NUCKS1-201ENST00000367142 ALPK2Q86TB3 2170 aa12.03□□□□□ -0.48
NUCKS1-201ENST00000367142 C11orf86A6NJI1 115 aa12.03□□□□□ -0.48
NUCKS1-201ENST00000367142 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
NUCKS1-201ENST00000367142 MIR7-3HGQ8N6C7 128 aa12.03□□□□□ -0.48
NUCKS1-201ENST00000367142 CRYGDP07320 174 aa12.02□□□□□ -0.48
NUCKS1-201ENST00000367142 PDE6GP18545 87 aa12.02□□□□□ -0.48
NUCKS1-201ENST00000367142 A0A0J9YX75 114 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 NDUFC2O95298 119 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 WDR81Q562E7 1941 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 CACNA1DQ01668 2161 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 HEATR1Q9H583 2144 aaKnown RBP12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 AKAP6Q13023 2319 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 LYRM9A8MSI8 78 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
NUCKS1-201ENST00000367142 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
NUCKS1-201ENST00000367142 UFSP1Q6NVU6 142 aa12.01□□□□□ -0.49
NUCKS1-201ENST00000367142 PLA2G5P39877 138 aa12.01□□□□□ -0.49
NUCKS1-201ENST00000367142 LGALS9O00182 355 aa12.01□□□□□ -0.49
NUCKS1-201ENST00000367142 SMIM9A6NGZ8 99 aa12.01□□□□□ -0.49
NUCKS1-201ENST00000367142 TNFRSF13BO14836 293 aaPredicted RBP12.01□□□□□ -0.49
NUCKS1-201ENST00000367142 TRBV6-1A0A0K0K1D8 114 aa12□□□□□ -0.49
NUCKS1-201ENST00000367142 C7orf33Q8WU49 177 aa12□□□□□ -0.49
NUCKS1-201ENST00000367142 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
NUCKS1-201ENST00000367142 FBXL19-AS1Q494R0 122 aa12□□□□□ -0.49
NUCKS1-201ENST00000367142 TCF20Q9UGU0 1960 aaKnown RBP12□□□□□ -0.49
NUCKS1-201ENST00000367142 A0A087WZ39 114 aa12□□□□□ -0.49
NUCKS1-201ENST00000367142 FAM19A1Q7Z5A9 133 aa12□□□□□ -0.49
NUCKS1-201ENST00000367142 KIR2DL5BA0A0G2JN68 375 aa11.99□□□□□ -0.49
NUCKS1-201ENST00000367142 KIR2DL5BA0A0G2JPC4 375 aa11.99□□□□□ -0.49
NUCKS1-201ENST00000367142 REG3AQ06141 175 aa11.99□□□□□ -0.49
NUCKS1-201ENST00000367142 KIR2DL5AQ8N109 375 aa11.99□□□□□ -0.49
NUCKS1-201ENST00000367142 DEFB131BA0A096LNP1 70 aa11.99□□□□□ -0.49
NUCKS1-201ENST00000367142 NPSP0C0P6 89 aa11.99□□□□□ -0.49
NUCKS1-201ENST00000367142 PRORYQ9H606 182 aa11.99□□□□□ -0.49
NUCKS1-201ENST00000367142 SIP14410 1827 aa11.98□□□□□ -0.49
NUCKS1-201ENST00000367142 IGLV1-47P01700 117 aa11.98□□□□□ -0.49
NUCKS1-201ENST00000367142 TRBV10-2A0A0K0K1G8 114 aa11.98□□□□□ -0.49
NUCKS1-201ENST00000367142 WFDC11Q8NEX6 87 aa11.98□□□□□ -0.49
NUCKS1-201ENST00000367142 VWA8A3KMH1 1905 aa11.98□□□□□ -0.49
NUCKS1-201ENST00000367142 FER1L5A0AVI2 2057 aa11.98□□□□□ -0.49
NUCKS1-201ENST00000367142 MDFICQ9P1T7 246 aa11.98□□□□□ -0.49
NUCKS1-201ENST00000367142 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
NUCKS1-201ENST00000367142 UPK3BQ9BT76 320 aa11.97□□□□□ -0.49
NUCKS1-201ENST00000367142 E9PLD3 99 aa11.97□□□□□ -0.49
NUCKS1-201ENST00000367142 UNQ9165/PRO28630Q6UXU0 137 aa11.97□□□□□ -0.49
NUCKS1-201ENST00000367142 CTRLP40313 264 aa11.97□□□□□ -0.49
NUCKS1-201ENST00000367142 PLXNA4Q9HCM2 1894 aa11.97□□□□□ -0.49
NUCKS1-201ENST00000367142 Q6YL49 198 aa11.96□□□□□ -0.49
NUCKS1-201ENST00000367142 INAFM1C9JVW0 142 aa11.96□□□□□ -0.49
NUCKS1-201ENST00000367142 IGHV4-31P0DP07 118 aa11.96□□□□□ -0.49
NUCKS1-201ENST00000367142 ZFAND2AQ8N6M9 145 aa11.96□□□□□ -0.49
NUCKS1-201ENST00000367142 UBE2D1P51668 147 aa11.96□□□□□ -0.5
NUCKS1-201ENST00000367142 FAM222AQ5U5X8 452 aa11.96□□□□□ -0.5
NUCKS1-201ENST00000367142 C20orf203Q8NBC4 194 aa11.96□□□□□ -0.5
NUCKS1-201ENST00000367142 CEP250Q9BV73 2442 aa11.96□□□□□ -0.5
NUCKS1-201ENST00000367142 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
NUCKS1-201ENST00000367142 CLEC2BQ92478 149 aa11.95□□□□□ -0.5
NUCKS1-201ENST00000367142 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
NUCKS1-201ENST00000367142 DEFB1P60022 68 aa11.94□□□□□ -0.5
NUCKS1-201ENST00000367142 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
NUCKS1-201ENST00000367142 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
NUCKS1-201ENST00000367142 HIGD1BQ9P298 99 aa11.94□□□□□ -0.5
NUCKS1-201ENST00000367142 FAM236AA0A1B0GUQ0 79 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 FAM236BA0A1B0GV22 79 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 FAM167A-AS1Q96KT0 104 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 H7C423 109 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 ODF3Q96PU9 254 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 BPY2O14599 106 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 Q6ZUT4 128 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 CHCHD10Q8WYQ3 142 aaPredicted RBP11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 K7ERS5 55 aa11.93□□□□□ -0.5
NUCKS1-201ENST00000367142 PTPRDP23468 1912 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 Q6ZTI0 123 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 TEN1Q86WV5 123 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 Q6ZSR3 168 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 LYPD6BQ8NI32 183 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 H3BT86 120 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 ODF3L1Q8IXM7 274 aa11.92□□□□□ -0.5
NUCKS1-201ENST00000367142 PHF3Q92576 2039 aaKnown RBP11.91□□□□□ -0.5
NUCKS1-201ENST00000367142 A0A096LNI7 61 aa11.91□□□□□ -0.5
NUCKS1-201ENST00000367142 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
NUCKS1-201ENST00000367142 KIAA2026Q5HYC2 2103 aa11.91□□□□□ -0.5
NUCKS1-201ENST00000367142 B5MCH6 92 aa11.91□□□□□ -0.5
NUCKS1-201ENST00000367142 MIFP14174 115 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms