RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 SSBP4Q9BWG4 385 aaPredicted RBP13.49□□□□□ -0.25
CEACAM3-201ENST00000344550 KRTAP17-1Q9BYP8 105 aa13.49□□□□□ -0.25
CEACAM3-201ENST00000344550 JPT2Q9H910 190 aa13.49□□□□□ -0.25
CEACAM3-201ENST00000344550 TMSB15BA0A087X1C1 80 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 GAGE12JA6NER3 117 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 M0R381 172 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 C1QBP02746 253 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 OR5AL1P0C617 328 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 RPL35P42766 123 aaKnown RBP13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 GAGE1Q13065 139 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 GAGE4Q13068 117 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 GAGE5Q13069 117 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 GAGE13Q4V321 117 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 GNG13Q9P2W3 67 aa13.48□□□□□ -0.25
CEACAM3-201ENST00000344550 SNAI2O43623 268 aa13.47□□□□□ -0.25
CEACAM3-201ENST00000344550 PDE6DO43924 150 aa13.47□□□□□ -0.25
CEACAM3-201ENST00000344550 TAGLN2P37802 199 aaKnown RBP13.47□□□□□ -0.25
CEACAM3-201ENST00000344550 TOR2AQ5JU69 321 aa13.47□□□□□ -0.25
CEACAM3-201ENST00000344550 C14orf178Q8N769 122 aaPredicted RBP13.47□□□□□ -0.25
CEACAM3-201ENST00000344550 RYR1P21817 5038 aa13.47□□□□□ -0.25
CEACAM3-201ENST00000344550 IFNA1P01562 189 aa13.46□□□□□ -0.25
CEACAM3-201ENST00000344550 RAB4BP61018 213 aa13.46□□□□□ -0.25
CEACAM3-201ENST00000344550 CCL20P78556 96 aa13.46□□□□□ -0.25
CEACAM3-201ENST00000344550 FAM74A4Q5TZK3 123 aa13.46□□□□□ -0.25
CEACAM3-201ENST00000344550 Q6ZNX1 250 aa13.46□□□□□ -0.25
CEACAM3-201ENST00000344550 TM2D2Q9BX73 214 aa13.46□□□□□ -0.25
CEACAM3-201ENST00000344550 TRAV8-3A0A0A6YYJ7 113 aa13.45□□□□□ -0.26
CEACAM3-201ENST00000344550 PSCAO43653 123 aa13.45□□□□□ -0.26
CEACAM3-201ENST00000344550 RPL36AP83881 106 aaKnown RBP13.45□□□□□ -0.26
CEACAM3-201ENST00000344550 MEF2BQ02080 365 aaPredicted RBP13.45□□□□□ -0.26
CEACAM3-201ENST00000344550 RPL36ALQ969Q0 106 aaKnown RBP13.45□□□□□ -0.26
CEACAM3-201ENST00000344550 TRBV7-3A0A075B6L6 115 aa13.44□□□□□ -0.26
CEACAM3-201ENST00000344550 A0A087WWL8 130 aa13.44□□□□□ -0.26
CEACAM3-201ENST00000344550 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
CEACAM3-201ENST00000344550 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
CEACAM3-201ENST00000344550 CHCHD7Q9BUK0 85 aa13.44□□□□□ -0.26
CEACAM3-201ENST00000344550 BIN3Q9NQY0 253 aa13.44□□□□□ -0.26
CEACAM3-201ENST00000344550 RPS20P60866 119 aaKnown RBP13.43□□□□□ -0.26
CEACAM3-201ENST00000344550 COX11Q9Y6N1 276 aa13.43□□□□□ -0.26
CEACAM3-201ENST00000344550 HSPG2P98160 4391 aa13.43□□□□□ -0.26
CEACAM3-201ENST00000344550 IGHV3-30P01768 117 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 IGHV3-33P01772 117 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 IGHV3-30-3P0DP02 117 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 IGHV3-30-5P0DP03 117 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 SPANXN1Q5VSR9 72 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 Q8N1X5 172 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 MAPKAPK5-AS1Q8N8E1 139 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 OR10AG1Q8NH19 301 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 Q9UF83 564 aa13.42□□□□□ -0.26
CEACAM3-201ENST00000344550 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 UBE2D3P61077 147 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 UBE2D2P62837 147 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 RPL19P84098 196 aaKnown RBP13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 CENPWQ5EE01 88 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 PRR27Q6MZM9 219 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 DAZAP1Q96EP5 407 aaKnown RBP13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 DERL1Q9BUN8 251 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 VAX2Q9UIW0 290 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 URGCP-MRPS24S4R325 110 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 PCLOQ9Y6V0 5065 aa13.41□□□□□ -0.26
CEACAM3-201ENST00000344550 XKRY2A2RUG3 117 aa13.4□□□□□ -0.26
CEACAM3-201ENST00000344550 BCL2P10415 239 aa13.4□□□□□ -0.26
CEACAM3-201ENST00000344550 GNG4P50150 75 aa13.4□□□□□ -0.26
CEACAM3-201ENST00000344550 AKAP14Q86UN6 197 aa13.4□□□□□ -0.26
CEACAM3-201ENST00000344550 DNAH5Q8TE73 4624 aa13.39□□□□□ -0.27
CEACAM3-201ENST00000344550 ELOBQ15370 118 aa13.39□□□□□ -0.27
CEACAM3-201ENST00000344550 NIT1Q86X76 327 aa13.39□□□□□ -0.27
CEACAM3-201ENST00000344550 Q9HAA7 133 aa13.39□□□□□ -0.27
CEACAM3-201ENST00000344550 C19orf71A6NCJ1 209 aa13.38□□□□□ -0.27
CEACAM3-201ENST00000344550 F2Z2F3 143 aa13.38□□□□□ -0.27
CEACAM3-201ENST00000344550 IGLV2-8P01709 118 aa13.38□□□□□ -0.27
CEACAM3-201ENST00000344550 TMEM97Q5BJF2 176 aa13.38□□□□□ -0.27
CEACAM3-201ENST00000344550 RMI2Q96E14 147 aa13.38□□□□□ -0.27
CEACAM3-201ENST00000344550 AP1S3Q96PC3 154 aa13.38□□□□□ -0.27
CEACAM3-201ENST00000344550 SMIM17P0DL12 118 aa13.37□□□□□ -0.27
CEACAM3-201ENST00000344550 GCSHP23434 173 aa13.37□□□□□ -0.27
CEACAM3-201ENST00000344550 PKIAP61925 76 aa13.37□□□□□ -0.27
CEACAM3-201ENST00000344550 ZNF56Q15929 161 aa13.37□□□□□ -0.27
CEACAM3-201ENST00000344550 KCNIP4Q6PIL6 250 aa13.37□□□□□ -0.27
CEACAM3-201ENST00000344550 MED9Q9NWA0 146 aa13.37□□□□□ -0.27
CEACAM3-201ENST00000344550 IGLC6P0CF74 106 aa13.36□□□□□ -0.27
CEACAM3-201ENST00000344550 CACNG7P62955 275 aa13.36□□□□□ -0.27
CEACAM3-201ENST00000344550 Q8N814 137 aa13.36□□□□□ -0.27
CEACAM3-201ENST00000344550 A0A087WX48 190 aa13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 P01737 135 aa13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 DAZ4Q86SG3 579 aaKnown RBP13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 C9orf62Q8N4C0 152 aa13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 FER1L6-AS1Q8NA97 138 aa13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 OR2D3Q8NGH3 330 aa13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 DAZ3Q9NR90 486 aaKnown RBP13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 KIF25-AS1Q9Y6Z4 181 aa13.35□□□□□ -0.27
CEACAM3-201ENST00000344550 APOBP04114 4563 aaKnown RBP13.34□□□□□ -0.27
CEACAM3-201ENST00000344550 TRBV6-8A0A0A6YYG3 113 aa13.34□□□□□ -0.27
CEACAM3-201ENST00000344550 RAB19A4D1S5 217 aa13.34□□□□□ -0.27
CEACAM3-201ENST00000344550 BLOC1S1P78537 153 aa13.34□□□□□ -0.27
CEACAM3-201ENST00000344550 WDR73Q6P4I2 378 aa13.34□□□□□ -0.27
CEACAM3-201ENST00000344550 NEXN-AS1Q8NBZ9 246 aa13.34□□□□□ -0.27
CEACAM3-201ENST00000344550 KRTAP4-5Q9BYR2 181 aa13.34□□□□□ -0.27
CEACAM3-201ENST00000344550 IGLV5-52A0A0A0MRZ9 124 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms