RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SHISA2Q6UWI4 295 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 A0A096LNJ9 63 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 TEX22C9J3V5 150 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 K7ENP7 123 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 M0R1W7 72 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 OVOL3O00110 214 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 SPINK13Q1W4C9 94 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 SPRY4Q9C004 299 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 HHLA3Q9XRX5 114 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 MSRB2Q9Y3D2 182 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 SZT2Q5T011 3432 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 TRAV12-1A0A0B4J245 112 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 E7EQL1 145 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 TRBV10-2A0A0K0K1G8 114 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 INAFM2P0DMQ5 153 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 IGHV3-53P01767 116 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 GNLYP22749 145 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 POLQO75417 2590 aa10.22□□□□□ -0.77
COL2A1-201ENST00000337299 RBMY1BA6NDE4 496 aaKnown RBP10.21□□□□□ -0.77
COL2A1-201ENST00000337299 RBMY1EA6NEQ0 496 aaKnown RBP10.21□□□□□ -0.77
COL2A1-201ENST00000337299 RBMY1DP0C7P1 496 aaKnown RBP10.21□□□□□ -0.77
COL2A1-201ENST00000337299 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.77
COL2A1-201ENST00000337299 RBMY1A1P0DJD3 496 aaKnown RBP10.21□□□□□ -0.77
COL2A1-201ENST00000337299 RBMY1CP0DJD4 496 aa10.21□□□□□ -0.77
COL2A1-201ENST00000337299 COX6B1P14854 86 aa10.21□□□□□ -0.77
COL2A1-201ENST00000337299 C1orf43Q9BWL3 253 aa10.21□□□□□ -0.77
COL2A1-201ENST00000337299 WI2-2373I1.2A0A1W2PRP0 233 aa10.21□□□□□ -0.77
COL2A1-201ENST00000337299 BRD3OSQ6XYD6 125 aa10.21□□□□□ -0.77
COL2A1-201ENST00000337299 JPT2Q9H910 190 aa10.21□□□□□ -0.77
COL2A1-201ENST00000337299 CTSGP08311 255 aa10.21□□□□□ -0.78
COL2A1-201ENST00000337299 A0A1B0GX51 115 aa10.21□□□□□ -0.78
COL2A1-201ENST00000337299 J3KT08 172 aa10.21□□□□□ -0.78
COL2A1-201ENST00000337299 IGLC6P0CF74 106 aa10.21□□□□□ -0.78
COL2A1-201ENST00000337299 NFE4Q86UQ8 179 aa10.21□□□□□ -0.78
COL2A1-201ENST00000337299 TOMM6Q96B49 74 aa10.21□□□□□ -0.78
COL2A1-201ENST00000337299 PTPRSQ13332 1948 aa10.2□□□□□ -0.78
COL2A1-201ENST00000337299 TNRC6BQ9UPQ9 1833 aaKnown RBP10.2□□□□□ -0.78
COL2A1-201ENST00000337299 RNF185Q96GF1 192 aa10.2□□□□□ -0.78
COL2A1-201ENST00000337299 Q6ZQT7 251 aa10.2□□□□□ -0.78
COL2A1-201ENST00000337299 CPAMD8Q8IZJ3 1885 aa10.2□□□□□ -0.78
COL2A1-201ENST00000337299 LEPROTO15243 131 aa10.2□□□□□ -0.78
COL2A1-201ENST00000337299 TET2Q6N021 2002 aaPredicted RBP10.2□□□□□ -0.78
COL2A1-201ENST00000337299 A0A0J9YY99 117 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 I3L3M4 83 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 NBL1P41271 181 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 UBE2E1P51965 193 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 CCL19Q99731 98 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 VCANP13611 3396 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 MRPS12O15235 138 aaKnown RBP10.19□□□□□ -0.78
COL2A1-201ENST00000337299 TRBV7-3A0A075B6L6 115 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 TRBV7-1A0A0A6YYK4 115 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 PRB1P04280 392 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 IGFL3Q6UXB1 125 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 DKK4Q9UBT3 224 aa10.19□□□□□ -0.78
COL2A1-201ENST00000337299 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
COL2A1-201ENST00000337299 SUMO4Q6EEV6 95 aa10.18□□□□□ -0.78
COL2A1-201ENST00000337299 RASL10AQ92737 203 aa10.18□□□□□ -0.78
COL2A1-201ENST00000337299 ZNF462Q96JM2 2506 aa10.18□□□□□ -0.78
COL2A1-201ENST00000337299 TRANK1O15050 2925 aa10.18□□□□□ -0.78
COL2A1-201ENST00000337299 GRNP28799 593 aaKnown RBP10.18□□□□□ -0.78
COL2A1-201ENST00000337299 PFN2P35080 140 aa10.18□□□□□ -0.78
COL2A1-201ENST00000337299 M0QXV9 152 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 Q6ZS46 218 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 MTORP42345 2549 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 BUB3O43684 328 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 SAA4P35542 130 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 PIFOQ8TCI5 191 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 U3KQK5 164 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 TRBV6-1A0A0K0K1D8 114 aa10.17□□□□□ -0.78
COL2A1-201ENST00000337299 RHODO00212 210 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
COL2A1-201ENST00000337299 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
COL2A1-201ENST00000337299 SOCS3O14543 225 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 FAM110DQ8TAY7 271 aaPredicted RBP10.16□□□□□ -0.78
COL2A1-201ENST00000337299 IGLV11-55A0A075B6I3 123 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 IGHV1-69DA0A0B4J2H0 117 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 THBDP07204 575 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 Q9H8V8 135 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 CRIP2P52943 208 aaPredicted RBP10.16□□□□□ -0.78
COL2A1-201ENST00000337299 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 PIMREGQ9BSJ6 248 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 PEMTQ9UBM1 199 aa10.16□□□□□ -0.78
COL2A1-201ENST00000337299 TRGV2A0A075B6R0 118 aa10.15□□□□□ -0.78
COL2A1-201ENST00000337299 LGALS9O00182 355 aa10.15□□□□□ -0.78
COL2A1-201ENST00000337299 IGF1P05019 195 aa10.15□□□□□ -0.78
COL2A1-201ENST00000337299 CDIP1Q9H305 208 aa10.15□□□□□ -0.78
COL2A1-201ENST00000337299 DSCAMO60469 2012 aa10.15□□□□□ -0.78
COL2A1-201ENST00000337299 LAMTOR3Q9UHA4 124 aa10.15□□□□□ -0.78
COL2A1-201ENST00000337299 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
COL2A1-201ENST00000337299 IGHV3-33P01772 117 aa10.14□□□□□ -0.79
COL2A1-201ENST00000337299 HAMPP81172 84 aa10.14□□□□□ -0.79
COL2A1-201ENST00000337299 CEMP1Q6PRD7 247 aaPredicted RBP10.14□□□□□ -0.79
COL2A1-201ENST00000337299 HERVK_113P63121 156 aa10.14□□□□□ -0.79
COL2A1-201ENST00000337299 H3BT86 120 aa10.13□□□□□ -0.79
COL2A1-201ENST00000337299 TRIAP1O43715 76 aa10.13□□□□□ -0.79
COL2A1-201ENST00000337299 FANCD2OSQ96PS1 177 aa10.13□□□□□ -0.79
COL2A1-201ENST00000337299 CRLF1O75462 422 aa10.13□□□□□ -0.79
COL2A1-201ENST00000337299 RHOHQ15669 191 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms