RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 TOMM6Q96B49 74 aa12.77□□□□□ -0.37
SBSPON-201ENST00000297354 LINC00574Q9H8X3 128 aa12.77□□□□□ -0.37
SBSPON-201ENST00000297354 TRAV12-2A0A075B6T6 113 aa12.77□□□□□ -0.37
SBSPON-201ENST00000297354 HOXB4P17483 251 aaPredicted RBP12.77□□□□□ -0.37
SBSPON-201ENST00000297354 Q6ZSV7 163 aa12.77□□□□□ -0.37
SBSPON-201ENST00000297354 CSMD1Q96PZ7 3565 aa12.77□□□□□ -0.37
SBSPON-201ENST00000297354 RAI1Q7Z5J4 1906 aaPredicted RBP12.77□□□□□ -0.37
SBSPON-201ENST00000297354 IGLV11-55A0A075B6I3 123 aa12.76□□□□□ -0.37
SBSPON-201ENST00000297354 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
SBSPON-201ENST00000297354 SMG1Q96Q15 3661 aaKnown RBP12.76□□□□□ -0.37
SBSPON-201ENST00000297354 KNCNA6PVL3 124 aa12.76□□□□□ -0.37
SBSPON-201ENST00000297354 USP9YO00507 2555 aaPredicted RBP12.76□□□□□ -0.37
SBSPON-201ENST00000297354 BUB3O43684 328 aa12.76□□□□□ -0.37
SBSPON-201ENST00000297354 VMO1Q7Z5L0 202 aa12.76□□□□□ -0.37
SBSPON-201ENST00000297354 VCYO14598 125 aa12.75□□□□□ -0.37
SBSPON-201ENST00000297354 PAX8Q06710 450 aa12.75□□□□□ -0.37
SBSPON-201ENST00000297354 TRAV12-1A0A0B4J245 112 aa12.74□□□□□ -0.37
SBSPON-201ENST00000297354 RHODO00212 210 aa12.74□□□□□ -0.37
SBSPON-201ENST00000297354 TSPEAR-AS2P59090 65 aa12.74□□□□□ -0.37
SBSPON-201ENST00000297354 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
SBSPON-201ENST00000297354 TRGV11A0A075B6L2 103 aa12.74□□□□□ -0.37
SBSPON-201ENST00000297354 RNASE1P07998 156 aaKnown RBP12.74□□□□□ -0.37
SBSPON-201ENST00000297354 PRR9Q5T870 116 aa12.74□□□□□ -0.37
SBSPON-201ENST00000297354 YAE1D1Q9NRH1 226 aa12.74□□□□□ -0.37
SBSPON-201ENST00000297354 CEMP1Q6PRD7 247 aaPredicted RBP12.73□□□□□ -0.37
SBSPON-201ENST00000297354 PIFOQ8TCI5 191 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 A8MZ25 164 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 TIMM21Q9BVV7 248 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 KLK9Q9UKQ9 250 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 TRAV41A0A0B4J266 112 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 CDX4O14627 284 aaPredicted RBP12.73□□□□□ -0.37
SBSPON-201ENST00000297354 CRYGBP07316 175 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 UBE2D1P51668 147 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 GAGE2AQ6NT46 116 aa12.73□□□□□ -0.37
SBSPON-201ENST00000297354 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
SBSPON-201ENST00000297354 B9A039 149 aa12.72□□□□□ -0.37
SBSPON-201ENST00000297354 PPP1R17O96001 155 aa12.72□□□□□ -0.37
SBSPON-201ENST00000297354 UBE2E1P51965 193 aa12.72□□□□□ -0.37
SBSPON-201ENST00000297354 NUP37Q8NFH4 326 aa12.72□□□□□ -0.37
SBSPON-201ENST00000297354 ZZEF1O43149 2961 aa12.71□□□□□ -0.37
SBSPON-201ENST00000297354 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.37
SBSPON-201ENST00000297354 OVOL3O00110 214 aa12.71□□□□□ -0.37
SBSPON-201ENST00000297354 IGHV3-30P01768 117 aa12.71□□□□□ -0.37
SBSPON-201ENST00000297354 IGHV3-30-5P0DP03 117 aa12.71□□□□□ -0.37
SBSPON-201ENST00000297354 IGHV3-33P01772 117 aa12.71□□□□□ -0.38
SBSPON-201ENST00000297354 PCSK5Q92824 1860 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 ELANEP08246 267 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 UBE2D3P61077 147 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 UBE2D2P62837 147 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 NCOR2Q9Y618 2525 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 PPDPFQ9H3Y8 114 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 PRRC2AP48634 2157 aaKnown RBP12.7□□□□□ -0.38
SBSPON-201ENST00000297354 TRIAP1O43715 76 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 KHDC1LQ5JSQ8 128 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 SLC25A29Q8N8R3 303 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
SBSPON-201ENST00000297354 KLK5Q9Y337 293 aaPredicted RBP12.69□□□□□ -0.38
SBSPON-201ENST00000297354 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
SBSPON-201ENST00000297354 PRR30Q53SZ7 412 aaPredicted RBP12.69□□□□□ -0.38
SBSPON-201ENST00000297354 SUMO4Q6EEV6 95 aa12.69□□□□□ -0.38
SBSPON-201ENST00000297354 DMXL1Q9Y485 3027 aa12.69□□□□□ -0.38
SBSPON-201ENST00000297354 M0QXV9 152 aa12.69□□□□□ -0.38
SBSPON-201ENST00000297354 IGHV3OR16-12A0A075B7B8 117 aa12.68□□□□□ -0.38
SBSPON-201ENST00000297354 IGHG4P01861 327 aa12.68□□□□□ -0.38
SBSPON-201ENST00000297354 ZNF22P17026 224 aaPredicted RBP12.68□□□□□ -0.38
SBSPON-201ENST00000297354 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
SBSPON-201ENST00000297354 THBDP07204 575 aa12.68□□□□□ -0.38
SBSPON-201ENST00000297354 USP9XQ93008 2570 aaPredicted RBP12.68□□□□□ -0.38
SBSPON-201ENST00000297354 IGHV7-81A0A0B4J1V7 117 aa12.68□□□□□ -0.38
SBSPON-201ENST00000297354 TRAV13-1A0A0B4J241 112 aa12.68□□□□□ -0.38
SBSPON-201ENST00000297354 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
SBSPON-201ENST00000297354 RNF5Q99942 180 aa12.68□□□□□ -0.38
SBSPON-201ENST00000297354 MSRB2Q9Y3D2 182 aa12.67□□□□□ -0.38
SBSPON-201ENST00000297354 LRBAP50851 2863 aa12.67□□□□□ -0.38
SBSPON-201ENST00000297354 LOC107984640A0A0U1RRK4 108 aa12.67□□□□□ -0.38
SBSPON-201ENST00000297354 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
SBSPON-201ENST00000297354 MUC6Q6W4X9 2439 aa12.67□□□□□ -0.38
SBSPON-201ENST00000297354 CACNA1AO00555 2505 aa12.67□□□□□ -0.38
SBSPON-201ENST00000297354 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 BRD3OSQ6XYD6 125 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 ICOSQ9Y6W8 199 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 TRBV10-2A0A0K0K1G8 114 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 NHLRC4P0CG21 123 aaPredicted RBP12.66□□□□□ -0.38
SBSPON-201ENST00000297354 TOMM7Q9P0U1 55 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 ACACBO00763 2458 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 GRNP28799 593 aaKnown RBP12.66□□□□□ -0.38
SBSPON-201ENST00000297354 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 LAMA5O15230 3695 aa12.66□□□□□ -0.38
SBSPON-201ENST00000297354 C9orf139Q6ZV77 190 aa12.65□□□□□ -0.38
SBSPON-201ENST00000297354 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
SBSPON-201ENST00000297354 CCL21O00585 134 aa12.65□□□□□ -0.38
SBSPON-201ENST00000297354 CIRBPQ14011 172 aaKnown RBP12.65□□□□□ -0.38
SBSPON-201ENST00000297354 SPINK13Q1W4C9 94 aa12.65□□□□□ -0.38
SBSPON-201ENST00000297354 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
SBSPON-201ENST00000297354 KAAG1Q9UBP8 84 aa12.64□□□□□ -0.39
SBSPON-201ENST00000297354 C8orf31Q8N9H6 132 aa12.64□□□□□ -0.39
SBSPON-201ENST00000297354 C20orf173Q96LM9 149 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms