RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 WDR86Q86TI4 376 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 ZNF492Q9P255 531 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 DOCK8Q8NF50 2099 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 IGLV3-9A0A075B6K5 115 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 C9JAW5 83 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 CTHRC1Q96CG8 243 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 PLXND1Q9Y4D7 1925 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 CHD8Q9HCK8 2581 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 TRBV5-7A0A0A0MS05 114 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 KIR2DL5BA0A0G2JN68 375 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 KIR2DL5BA0A0G2JPC4 375 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 A0A1W2PRE2 83 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 SLPIP03973 132 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 BAALC-AS2P0C853 105 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 LINC00205P59089 165 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 MLANAQ16655 118 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 Q6ZVQ6 151 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 KIR2DL5AQ8N109 375 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 SLC25A29Q8N8R3 303 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 ANKRD36A6QL64 1941 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 SERP1Q9Y6X1 66 aa3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 PRRC2AP48634 2157 aaKnown RBP3.36□□□□□ -1.87
RAPGEF6-201ENST00000296859 TRBV5-5A0A0J9YX44 114 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 SMIM27A0A1W2PRY6 76 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 CCL20P78556 96 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 IFITM3Q01628 133 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 C4orf3Q8WVX3 66 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 PRO0255Q9UI72 69 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 IFI6P09912 130 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 CXCL3P19876 107 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 PRORYQ9H606 182 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 PLXNB2O15031 1838 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 TRBV5-3A0A0A0MS03 114 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 FRMD6-AS1P0C7T7 363 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 CARD19Q96LW7 228 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 RETNLBQ9BQ08 111 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 SHANK2-AS3Q9BTD1 123 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 Q9H8V8 135 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 UBR3Q6ZT12 1888 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 TEX49A0A1B0GTD5 131 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 GNRH2O43555 120 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 NANOS2P60321 138 aaKnown RBP3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 C1orf194Q5T5A4 169 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 TMEM141Q96I45 108 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 FAM215AQ9Y5M1 114 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 ZNF706Q9Y5V0 76 aaPredicted RBP3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 CHD5Q8TDI0 1954 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 H3BUA1 57 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 LINC00271P0C7V0 271 aa3.35□□□□□ -1.87
RAPGEF6-201ENST00000296859 C2orf70A6NJV1 201 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 IGHG2P01859 326 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 LRRC75A-AS1Q8N1F1 130 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 OSTCQ9NRP0 149 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 ORMDL1Q9P0S3 153 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 FBLN5Q9UBX5 448 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 POLR2AP24928 1970 aaKnown RBP3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 LRRK2Q5S007 2527 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 A0A087WV48 116 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 CCL25O15444 150 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 DIRC1Q969H9 104 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 TET1Q8NFU7 2136 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 TICRRQ7Z2Z1 1910 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 C9JQL5 133 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 LOXL1Q08397 574 aaPredicted RBP3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 C3orf22Q8N5N4 141 aa3.34□□□□□ -1.87
RAPGEF6-201ENST00000296859 DOCK1Q14185 1865 aa3.34□□□□□ -1.88
RAPGEF6-201ENST00000296859 TNRC6CQ9HCJ0 1690 aaKnown RBP3.34□□□□□ -1.88
RAPGEF6-201ENST00000296859 LY6G6FQ5SQ64 297 aa3.34□□□□□ -1.88
RAPGEF6-201ENST00000296859 JMJD1CQ15652 2540 aa3.34□□□□□ -1.88
RAPGEF6-201ENST00000296859 MCM3APO60318 1980 aa3.34□□□□□ -1.88
RAPGEF6-201ENST00000296859 TRBV10-2A0A0K0K1G8 114 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 TMEM213A2RRL7 107 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 CTRLP40313 264 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 OPRPNQ99935 248 aaPredicted RBP3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 UPK3BQ9BT76 320 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 TRBV20-1A0A075B6N2 111 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 WIPF3A6NGB9 483 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 PRR4Q16378 134 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 SPATA12Q7Z6I5 190 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 SRSF8Q9BRL6 282 aaKnown RBP3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 TM2D1Q9BX74 207 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 NPDC1Q9NQX5 325 aaPredicted RBP3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 PLAC8L1A1L4L8 177 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 C19orf84I3L1E1 186 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 C1orf229Q6ZS94 237 aaPredicted RBP3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 MRPS18AQ9NVS2 196 aaKnown RBP3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 SCN8AQ9UQD0 1980 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 LY6LH3BQJ8 138 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 MED14OSP0DP75 135 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 TMEM61Q8N0U2 210 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 C1orf158Q8N1D5 194 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 LINC00269Q8N2A0 174 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 LYPD1Q8N2G4 141 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 CTSZQ9UBR2 303 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 PRR14LQ5THK1 2151 aa3.33□□□□□ -1.88
RAPGEF6-201ENST00000296859 PIEZO2Q9H5I5 2752 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms