RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Greb1Q3UHK3 1954 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ighv8-9A0A0G2JET1 119 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gata2O09100 480 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ca11O70354 328 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Hoxa3P02831 443 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Fgf4P11403 202 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Rtl4Q3URY0 304 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Hs3st6Q5GFD5 342 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Zfp455Q7M6X9 461 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 LgalslbQ7TPX9 165 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1246Q7TQZ6 314 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 C1qtnf4Q8R066 326 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr476Q8VGI4 310 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ndufb3Q9CQZ6 104 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Sh2d6Q9D413 297 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cd5lQ9QWK4 352 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Mixl1Q9WUI0 231 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm26920S4R2A5 56 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Pglyrp3A1A547 347 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 C2cd4aE9Q861 334 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Rpl30P62889 115 aaKnown RBP7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 KncnQ307W7 124 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 SnrpcQ62241 159 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Try10Q792Z1 246 aaKnown RBP7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr968Q8VFN4 314 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Arfgef3Q3UGY8 2170 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ighv7-3A0A075B5R2 120 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Trav12d-1A0N8R0 115 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm5093E9PZB3 174 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Srp14P16254 110 aaKnown RBP7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Tmem219Q9D123 240 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Usp34Q6ZQ93 3582 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1118A0A0J9YUE7 307 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Irf2bp2E9Q1P8 570 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ssty1P13675 232 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Fabp6P51162 128 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr715Q8VG49 315 aa7.88□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Col5a3Q9JLI2 1739 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Iqcf6G3UWF2 157 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr143P34985 313 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Defa-rs7P50715 91 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1026Q7TR90 307 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1256Q8VGP1 306 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Shisal2bQ9D1Y9 158 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gab2Q9Z1S8 665 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1245A0A1L1SQJ6 307 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 D930048N14RikA2AA67 225 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm14124A2AU83 715 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm21732J3QM79 361 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm21921J3QNB5 361 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Slc25a17O70579 307 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gosr1O88630 250 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Hoxa6P09092 232 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr482Q8VG03 323 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Mien1Q9CQ86 115 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Zfp456B2RUK9 458 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cd59aO55186 123 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr823Q7TRH2 315 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Tnfsf18Q7TS55 173 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Eda2rQ8BX35 297 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Klk15Q8CGR4 254 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 PaxxQ8K0Y7 205 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr824Q8VFU4 315 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Prss41Q920S2 322 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Dram1Q9DC58 238 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Znf385cA2A5E6 429 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cldn34c3J3QJW5 233 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Hist1h2bmP10854 126 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Plp1P60202 277 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 SelenotP62342 195 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 UngP97931 306 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Pmis2Q497Q9 96 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Hist1h2bhQ64478 126 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Hist2h2bbQ64525 126 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Fam222bQ6P539 562 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Snrnp40Q6PE01 358 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Hist1h2bcQ6ZWY9 126 aaKnown RBP7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Spink6Q8BT20 105 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Q9D7E4 109 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 2200002J24RikQ9D807 110 aa7.87□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Trav4-2A0A075B638 110 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 V1rd19Q3KNP5 305 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cks1brtQ3UNC9 96 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Rnf126Q91YL2 313 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cldn16Q925N4 235 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr972Q9EQA2 314 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Fbln5Q9WVH9 448 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Fxyd1Q9Z239 92 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Tcf20Q9EPQ8 1987 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Esp38A8R0X1 80 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Frrs1lB1AXV0 293 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cldn34c2J3QNM1 233 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gstp1P19157 210 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ssbp4Q3U4B1 363 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Pef1Q8BFY6 275 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Habp2Q8K0D2 558 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cldn34c1Q8K193 234 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Pip4p2Q9CZX7 257 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Tctex1d1Q9D5I4 173 aa7.86□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Fstl3Q9EQC7 256 aa7.86□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms