RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Platr25A0A1Y7VIZ1 466 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm16519F8VQK7 162 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Id3P41133 119 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Patz1Q5NBY9 687 aaKnown RBP11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr147Q60886 317 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 MiaQ61865 130 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Pgam5Q8BX10 288 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm9949Q8C9F4 104 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr816Q8VFU2 312 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Zmat5Q9CQR5 170 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Tmem128Q9CZB9 163 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Pdzd11Q9CZG9 140 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Hsd17b6Q9R092 317 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Timm23Q9WTQ8 209 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 StrapQ9Z1Z2 350 aaKnown RBP11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 Bahcc1Q3UHR0 2643 aa11.89□□□□□ -0.51
Nup88-202ENSMUST00000108530 AcanQ61282 2132 aaKnown RBP11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Trav4-2A0A075B638 110 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Fut1O09160 376 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 IfngP01580 155 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Arrdc5Q497K5 325 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 RetnlgQ8K426 117 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Vmn1r222Q8R269 308 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Vmn1r225Q8R2A5 298 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Uqcrfs1Q9CR68 274 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Tmem88Q9D0N8 159 aa11.88□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr913E9Q716 312 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm20767O70517 169 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gcm1P70348 436 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gfra1P97785 468 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Q8BG31 207 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr802Q8VGJ2 312 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ssbp2Q9CYZ8 361 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Fbxo24Q9D417 589 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Q9D9C7 252 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ndufaf3Q9JKL4 185 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gpr34Q9R1K6 375 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm20532G3UXR8 106 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gata2O09100 480 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Tmem95P0DJF3 176 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Klk1b22P15948 259 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Zc2hc1aQ8BJH1 324 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Aqp6Q8C4A0 293 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ercc8Q8CFD5 397 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 RhebQ921J2 184 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Rpusd4Q9CWX4 377 aaKnown RBP11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Myo9aQ8C170 2542 aa11.87□□□□□ -0.51
Nup88-202ENSMUST00000108530 Tex54G3UW99 86 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Vmn1r60G3UY47 300 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm8653K9J7G2 307 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Vmn1r117L7N2C9 307 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr123Q8VFQ1 309 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Mus81Q91ZJ0 551 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Tmem208Q9CR96 173 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Atoh7Q9Z2E5 149 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Trav13n-4A0A0G2JG01 110 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Zfp971A2BFG8 470 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr196E9PYP4 309 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm14288E9Q9W0 88 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr191L7N1Z8 309 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Edn3P48299 214 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Spam1P48794 512 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 FusP56959 518 aaKnown RBP11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm4792Q569Q2 183 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr411Q7TRW8 315 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 BC049730Q810N3 246 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Fam216bQ8CC14 138 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Vmn1r54Q9EPB8 315 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Zfp119aQ9JIC0 545 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Lsm4Q9QXA5 137 aaKnown RBP11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Chst4Q9R1I1 388 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Mixl1Q9WUI0 231 aa11.86□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ighv3-4A0A0A6YXF1 117 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr893K7N678 312 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Dnajc30P59041 219 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Lmo4P61969 165 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 ShbgP97497 403 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 FshbQ60687 130 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr112Q8C0S2 320 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ammecr1Q9JHT5 344 aaKnown RBP11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Try5Q9QUK9 246 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Try4Q9R0T7 246 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Arpc1bQ9WV32 372 aaKnown RBP11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Prpf8Q99PV0 2335 aaKnown RBP11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Mef2bO55087 349 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Bloc1s1O55102 125 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Lgals3P16110 264 aaKnown RBP11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 ErhP84089 104 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Rhox10Q4TU83 196 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Rab31Q921E2 194 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Rhebl1Q9D8T3 184 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr159Q9QZ19 319 aa11.85□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ctxnd1A0A1B0GST9 59 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Olfr912A0A1L1SSS5 310 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm20825J3QM67 227 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Pfdn2O70591 154 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Cox7a2P48771 83 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Ssty2Q149W4 227 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 CenptQ3TJM4 515 aa11.84□□□□□ -0.51
Nup88-202ENSMUST00000108530 Gm21394Q497R7 227 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms