RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Cntnap5aQ0V8T9 1304 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Vmn1r82A0A087WRV1 305 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Cytl1A1E5L0 139 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm16494E9Q2Z4 87 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Pglyrp1O88593 182 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 P01748 117 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Zfp941Q3URY5 674 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Trav21-dv12A0A075B6C4 109 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Mp68P56379 58 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Zfp41Q02526 198 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Foxi1Q922I5 372 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 1700086D15RikQ9D9E9 151 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Magi3Q9EQJ9 1476 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr178E9Q9T3 319 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Dcpp1L7N1X9 171 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 P01789 122 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Hoxc5P32043 222 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Slc25a33Q3TZX3 320 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Klf7Q99JB0 301 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Dll3O88516 592 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Prss2P07146 246 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm5225J3QPL3 108 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tnfaip6O08859 275 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 P01806 116 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Zfp975Q6NVD6 525 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tmem42Q9CR22 157 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tmprss5Q9ER04 455 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Uggt1Q6P5E4 1551 aa7.36□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tex48Q9DA81 110 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gpr88Q9EPB7 384 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Znf609Q8BZ47 1413 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tmem74bA2AU34 232 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 HbaP01942 142 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 GalpQ810H5 117 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 B230307C23RikQ8BLB2 64 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Sft2d2Q8VD57 159 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Timm17bQ9Z0V7 172 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Znf518aB2RRF6 1478 aaKnown RBP7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gpx1P11352 201 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Cd59bP58019 129 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm16223Q8CBM3 117 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 C1qtnf5Q8K479 243 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Dot1lQ6XZL8 1540 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tex26Q0VB26 296 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 PcolceQ61398 468 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 LgalslbQ7TPX9 165 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Vmn1r178Q8R2B6 304 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ndufa3Q9CQ91 84 aa7.35□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ighv6-5A0A0A6YWS9 119 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Fcer1gP20491 86 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Zglp1Q1WG82 266 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr204E9Q8M0 305 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Oosp3G5E8D7 195 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 PdpnQ62011 172 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tmem70Q921N7 253 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Kcnmb4Q9JIN6 210 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Wdr62Q3U3T8 1523 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm15821A6X8J8 139 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ccl17F6R5P4 103 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Sssca1P56873 199 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Rps28P62858 69 aaKnown RBP7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Iba57Q8CAK1 358 aaKnown RBP7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm10778A0A087WNP5 499 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 0610012G03RikA0A0J9YTR2 95 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Adamtsl5D3Z689 485 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Lypd4Q8BVP6 246 aa7.34□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm20795J3QP49 232 aa7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Rpl27aP14115 148 aaKnown RBP7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tmem14aP56983 99 aa7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Spryd7Q3TFQ1 196 aa7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Mcrip1Q3UGS4 97 aa7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Trappc1Q5NCF2 145 aa7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tex36Q9D5N9 219 aa7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gli2Q0VGT2 1544 aa7.34□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01650 108 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ube2g1P62254 170 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tomm6Q9CQN3 74 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm12887B1AVM1 119 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01753 117 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Dtx1Q61010 627 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 SdhdQ9CXV1 159 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Paqr4Q9JJE4 273 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Prex2Q3LAC4 1598 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ighv13-2A0A0A6YWN3 119 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01644 108 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm5629P06327 117 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Etv2P41163 335 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Dand5Q76LW6 185 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 A730061H03RikQ8BGD2 154 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ccl8Q9Z121 97 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 A530084C06RikQ3UTW2 186 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm10604Q3V0X7 143 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 DmknQ6P253 517 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Rspo4Q8BJ73 228 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm10118Q8C8J5 116 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Mrps36Q9CQX8 102 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Hcfc1r1Q9CYQ5 120 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Plekhb2Q9QZC7 221 aa7.33□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm10447Q3UQ92 135 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Olfr488Q8VG02 314 aa7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms