RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TMED1Q13445 227 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 RHOHQ15669 191 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 HIST3H3Q16695 136 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM170BQ5T4T1 132 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 HIST2H3PS2Q5TEC6 136 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 SPOPLQ6IQ16 392 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 EIF5AL1Q6IS14 154 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 Q6JHZ5 121 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 LPCAT3Q6P1A2 487 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 SFXN4Q6P4A7 337 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 ZNF818PQ6ZRF7 136 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CYP2G1PQ6ZSU1 146 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 WFDC13Q8IUB5 93 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 PDZD9Q8IXQ8 264 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 DEFB123Q8N688 67 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 ANKRD29Q8N6D5 301 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 Q8N8P6 123 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 FDCSPQ8NFU4 85 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 OR8J2Q8NGG1 315 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 OR5D16Q8NGK9 328 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 OR5AK2Q8NH90 309 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 STAG3L4Q8TBR4 150 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 COX7B2Q8TF08 81 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 FAM172AQ8WUF8 416 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 BRK1Q8WUW1 75 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 SMIM4Q8WVI0 70 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CLEC2BQ92478 149 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 POP5Q969H6 163 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TOMM6Q96B49 74 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 DPH3Q96FX2 82 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 C8orf76Q96K31 380 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 C2orf50Q96LR7 162 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 HYLS1Q96M11 299 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CIB3Q96Q77 187 aaPredicted RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 MRPL34Q9BQ48 92 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CMSS1Q9BQ75 279 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 VPS25Q9BRG1 176 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 EFCAB11Q9BUY7 163 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CST11Q9H112 138 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 MRPL40Q9NQ50 206 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CDC42SE2Q9NRR3 84 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 NDUFA4L2Q9NRX3 87 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 FBXL12Q9NXK8 326 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CRIPTQ9P021 101 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 HIGD1BQ9P298 99 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CDKN2A-AS1Q9UH64 79 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 NDUFA12Q9UI09 145 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CYSLTR1Q9Y271 337 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 UBE2D4Q9Y2X8 147 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 NDUFAF1Q9Y375 327 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 GAPVD1Q14C86 1478 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 PTPRDP23468 1912 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 HELZP42694 1942 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 COL4A6Q14031 1691 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 WDR97A6NE52 1622 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 PHRF1Q9P1Y6 1649 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TSC2P49815 1807 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CFAP54Q96N23 3096 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 ADCY9O60503 1353 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SSC5DA1L4H1 1573 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SCN8AQ9UQD0 1980 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 COL24A1Q17RW2 1714 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PTPRFP10586 1907 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 GOLGA3Q08378 1498 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 A0A087WUJ7 227 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TRAV5A0A0B4J249 113 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TRBV7-4A0A0J9YYF1 115 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 LINC00959A0A1B0GUT2 108 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 A0A1B0GW64 132 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 FAM223BA6NKX1 122 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM210A6NLX4 147 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 A8MT66 165 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM114B3SHH9 223 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 HCG22E2RYF7 251 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 J3QRK9 145 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 M0R135 149 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 CDC42EP2O14613 210 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 RER1O15258 196 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 CALUO43852 315 aaPredicted RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 CST8O60676 142 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 EDF1O60869 148 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PITX3O75364 302 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 OR2J2O76002 312 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 CRYZL1O95825 349 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 OR2H2O95918 312 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 FAM107AO95990 144 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 IFNA21P01568 189 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 IFNA5P01569 189 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TRACP01848 142 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 IFNA6P05013 189 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 IFNA4P05014 189 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 IFNA16P05015 189 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SERPINA6P08185 405 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 OR5G3P0C626 314 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SAA1P0DJI8 122 aaPredicted RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SMIM17P0DL12 118 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SCGB1A1P11684 91 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 HLA-EP13747 358 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 CDKN2CP42773 168 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms