RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 PRR25Q96S07 402 aa8.2□□□□□ -1.1
COL25A1-209ENST00000622134 TP53TG1Q9Y2A0 90 aa8.2□□□□□ -1.1
COL25A1-209ENST00000622134 SPG11Q96JI7 2443 aa8.2□□□□□ -1.1
COL25A1-209ENST00000622134 KIF26AQ9ULI4 1882 aaPredicted RBP8.2□□□□□ -1.1
COL25A1-209ENST00000622134 FRMD6-AS1P0C7T7 363 aa8.19□□□□□ -1.1
COL25A1-209ENST00000622134 HOXD3P31249 432 aaPredicted RBP8.19□□□□□ -1.1
COL25A1-209ENST00000622134 SRSF2Q01130 221 aaKnown RBP8.19□□□□□ -1.1
COL25A1-209ENST00000622134 C8orf49Q96NF6 230 aa8.19□□□□□ -1.1
COL25A1-209ENST00000622134 TNFRSF13BO14836 293 aaPredicted RBP8.19□□□□□ -1.1
COL25A1-209ENST00000622134 LINC01620Q4KN68 170 aa8.19□□□□□ -1.1
COL25A1-209ENST00000622134 ZNF876PQ49A33 203 aa8.19□□□□□ -1.1
COL25A1-209ENST00000622134 ZNF493Q6ZR52 646 aa8.19□□□□□ -1.1
COL25A1-209ENST00000622134 ZNRD1Q9P1U0 126 aa8.19□□□□□ -1.1
COL25A1-209ENST00000622134 NCOR2Q9Y618 2525 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 IGHV4-38-2P0DP08 117 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 NPBQ8NG41 125 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 TNRC6AQ8NDV7 1962 aaKnown RBP8.18□□□□□ -1.1
COL25A1-209ENST00000622134 RBMY1FQ15415 496 aaKnown RBP8.18□□□□□ -1.1
COL25A1-209ENST00000622134 GATD1Q8NB37 220 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 ZNF524Q96C55 264 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 SMAD5-AS1Q9Y6J3 95 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 MED13LQ71F56 2210 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 PTPN13Q12923 2485 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 IGHV1OR15-1A0A075B7D0 117 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 NOTCH3Q9UM47 2321 aa8.18□□□□□ -1.1
COL25A1-209ENST00000622134 H3BT86 120 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 ERCC8Q13216 396 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 UBL5Q9BZL1 73 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 IGKV3D-20A0A0C4DH25 116 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 A0A0U1RRA0 63 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 PIFOQ8TCI5 191 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 A0A1B0GXF2 115 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 TRAV12-1A0A0B4J245 112 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 A0A0B4J2C4 111 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 VWC2LB2RUY7 222 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
COL25A1-209ENST00000622134 NDUFA11Q86Y39 141 aa8.17□□□□□ -1.1
COL25A1-209ENST00000622134 NRGNQ92686 78 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 MRPL53Q96EL3 112 aaKnown RBP8.16□□□□□ -1.1
COL25A1-209ENST00000622134 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 UQCRQO14949 82 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 IGHV3-53P01767 116 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 ASPHD1Q5U4P2 390 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
COL25A1-209ENST00000622134 SPART-AS1P0CW21 52 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 ODF3L1Q8IXM7 274 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 C11orf53Q8IXP5 236 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 ALPK3Q96L96 1907 aa8.16□□□□□ -1.1
COL25A1-209ENST00000622134 KRTAP27-1Q3LI81 207 aa8.15□□□□□ -1.1
COL25A1-209ENST00000622134 LENEPQ9Y5L5 61 aa8.15□□□□□ -1.1
COL25A1-209ENST00000622134 H3BRN7 92 aa8.15□□□□□ -1.1
COL25A1-209ENST00000622134 LINC00158P58513 81 aa8.15□□□□□ -1.1
COL25A1-209ENST00000622134 YLPM1P49750 1951 aaKnown RBP8.15□□□□□ -1.1
COL25A1-209ENST00000622134 RPL32P62910 135 aaKnown RBP8.15□□□□□ -1.11
COL25A1-209ENST00000622134 ODF1Q14990 250 aa8.15□□□□□ -1.11
COL25A1-209ENST00000622134 MRAPQ8TCY5 172 aa8.15□□□□□ -1.11
COL25A1-209ENST00000622134 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.11
COL25A1-209ENST00000622134 CCL18P55774 89 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 SPINK13Q1W4C9 94 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 ADAMTS9Q9P2N4 1935 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 K7EMT4 169 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 IGFBPL1Q8WX77 278 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 TRAV13-1A0A0B4J241 112 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 SIRPDQ9H106 197 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 IGHV4-31P0DP07 118 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 PRB4P10163 310 aaPredicted RBP8.14□□□□□ -1.11
COL25A1-209ENST00000622134 RBM3P98179 157 aaKnown RBP8.14□□□□□ -1.11
COL25A1-209ENST00000622134 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
COL25A1-209ENST00000622134 IGHG2P01859 326 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 C4orf3Q8WVX3 66 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 ATRXP46100 2492 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 A0A1B0GX51 115 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 PAX4O43316 350 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 WT1-ASQ06250 92 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 PTH2Q96A98 100 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 TTTY13Q9BZ97 58 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 ZNF561-AS1K7EIQ3 104 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 RHOHQ15669 191 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
COL25A1-209ENST00000622134 LMO4P61968 165 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 C5orf56Q8N8D9 126 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 FAM167A-AS1Q96KT0 104 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 TMEM243Q9BU79 118 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 C6orf226Q5I0X4 101 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
COL25A1-209ENST00000622134 LAMTOR3Q9UHA4 124 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 ARFGEF3Q5TH69 2177 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 TRBV6-1A0A0K0K1D8 114 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 A4D1N5 150 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 KNCNA6PVL3 124 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 C19orf84I3L1E1 186 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 WFDC11Q8NEX6 87 aa8.12□□□□□ -1.11
COL25A1-209ENST00000622134 TRAV26-2A0A0B4J265 109 aa8.11□□□□□ -1.11
COL25A1-209ENST00000622134 C19orf71A6NCJ1 209 aa8.11□□□□□ -1.11
COL25A1-209ENST00000622134 BAALC-AS2P0C853 105 aa8.11□□□□□ -1.11
COL25A1-209ENST00000622134 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms