RNA–Protein interactions for RNA: ENST00000617399.1

NBR1-208, Transcript of NBR1, autophagy cargo receptor, human

Gene NBR1, Length 63 nt, Biotype misc RNA, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBR1-208	ENST00000617399	ARL2BP	Q9Y2Y0	163 aa		-2.31	□□□□□ -2.78
NBR1-208	ENST00000617399	NUP210	Q8TEM1	1887 aa	Predicted RBP	-2.31	□□□□□ -2.78
NBR1-208	ENST00000617399	KIDINS220	Q9ULH0	1771 aa		-2.31	□□□□□ -2.78
NBR1-208	ENST00000617399	PTPRG	P23470	1445 aa		-2.32	□□□□□ -2.78
NBR1-208	ENST00000617399	RPL19	P84098	196 aa	Known RBP	-2.32	□□□□□ -2.78
NBR1-208	ENST00000617399	LTC4S	Q16873	150 aa		-2.32	□□□□□ -2.78
NBR1-208	ENST00000617399	PHB2	Q99623	299 aa		-2.32	□□□□□ -2.78
NBR1-208	ENST00000617399	SS18L2	Q9UHA2	77 aa		-2.32	□□□□□ -2.78
NBR1-208	ENST00000617399	MYO7B	Q6PIF6	2116 aa		-2.33	□□□□□ -2.78
NBR1-208	ENST00000617399	TMEM210	A6NLX4	147 aa		-2.33	□□□□□ -2.78
NBR1-208	ENST00000617399	ATG12	O94817	140 aa		-2.33	□□□□□ -2.78
NBR1-208	ENST00000617399	ADCYAP1	P18509	176 aa		-2.33	□□□□□ -2.78
NBR1-208	ENST00000617399	BLCAP	P62952	87 aa		-2.33	□□□□□ -2.78
NBR1-208	ENST00000617399	FAM74A4	Q5TZK3	123 aa		-2.33	□□□□□ -2.78
NBR1-208	ENST00000617399	SPINK8	P0C7L1	97 aa		-2.34	□□□□□ -2.78
NBR1-208	ENST00000617399	ACYP2	P14621	99 aa		-2.34	□□□□□ -2.78
NBR1-208	ENST00000617399	INSL4	Q14641	139 aa		-2.34	□□□□□ -2.78
NBR1-208	ENST00000617399	TRBV7-1	A0A0A6YYK4	115 aa		-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	TRBV27	A0A0K0K1C4	114 aa		-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	CXorf51A	A0A1B0GTR3	108 aa		-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	TMEM14DP	A8MWL7	114 aa		-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	ARF6	P62330	175 aa		-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	OR51A4	Q8NGJ6	313 aa		-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	FAM135B	Q49AJ0	1406 aa		-2.35	□□□□□ -2.79
NBR1-208	ENST00000617399	NIPSNAP2	O75323	286 aa		-2.36	□□□□□ -2.79
NBR1-208	ENST00000617399	IFNA21	P01568	189 aa		-2.36	□□□□□ -2.79
NBR1-208	ENST00000617399	RGS21	Q2M5E4	152 aa		-2.36	□□□□□ -2.79
NBR1-208	ENST00000617399	CAMSAP1	Q5T5Y3	1602 aa		-2.36	□□□□□ -2.79
NBR1-208	ENST00000617399	MYH3	P11055	1940 aa		-2.36	□□□□□ -2.79
NBR1-208	ENST00000617399	TRAV22	A0A0B4J277	110 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	IGHV1-24	A0A0C4DH33	117 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	TRDV1	A0A1B0GX56	115 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	GABARAP	H6UMI1	98 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399		K7EQZ3	153 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	SDC2	P34741	201 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	MT4	P47944	62 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	TEX29	Q8N6K0	151 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	MORN4	Q8NDC4	146 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	OR4S1	Q8NGB4	309 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	NUBP2	Q9Y5Y2	271 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	TECPR2	O15040	1411 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	PLXNA2	O75051	1894 aa		-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	PRKDC	P78527	4128 aa	Known RBP	-2.37	□□□□□ -2.79
NBR1-208	ENST00000617399	TCRBV3S1	A0A5B6	114 aa		-2.38	□□□□□ -2.79
NBR1-208	ENST00000617399	MFSD11	O43934	449 aa		-2.38	□□□□□ -2.79
NBR1-208	ENST00000617399	CKS2	P33552	79 aa		-2.38	□□□□□ -2.79
NBR1-208	ENST00000617399	OTOS	Q8NHW6	89 aa		-2.38	□□□□□ -2.79
NBR1-208	ENST00000617399	DGCR14	Q96DF8	476 aa	Known RBP	-2.38	□□□□□ -2.79
NBR1-208	ENST00000617399	LAMTOR3	Q9UHA4	124 aa		-2.38	□□□□□ -2.79
NBR1-208	ENST00000617399	MXRA5	Q9NR99	2828 aa		-2.38	□□□□□ -2.79
NBR1-208	ENST00000617399	OR2T2	Q6IF00	324 aa		-2.39	□□□□□ -2.79
NBR1-208	ENST00000617399	LINC00305	Q7Z4B0	112 aa		-2.39	□□□□□ -2.79
NBR1-208	ENST00000617399	C4orf33	Q8N1A6	199 aa		-2.39	□□□□□ -2.79
NBR1-208	ENST00000617399	BATF3	Q9NR55	127 aa		-2.39	□□□□□ -2.79
NBR1-208	ENST00000617399	WDR97	A6NE52	1622 aa		-2.39	□□□□□ -2.79
NBR1-208	ENST00000617399	GOLGA3	Q08378	1498 aa		-2.39	□□□□□ -2.79
NBR1-208	ENST00000617399	BCL9L	Q86UU0	1499 aa		-2.39	□□□□□ -2.79
NBR1-208	ENST00000617399	ZNF142	P52746	1687 aa	Predicted RBP	-2.4	□□□□□ -2.79
NBR1-208	ENST00000617399		G3V318	75 aa		-2.4	□□□□□ -2.79
NBR1-208	ENST00000617399	CCL3L1	P16619	93 aa		-2.4	□□□□□ -2.79
NBR1-208	ENST00000617399	SLC48A1	Q6P1K1	146 aa		-2.4	□□□□□ -2.79
NBR1-208	ENST00000617399	GINS3	Q9BRX5	216 aa		-2.4	□□□□□ -2.79
NBR1-208	ENST00000617399	MED11	Q9P086	117 aa		-2.4	□□□□□ -2.79
NBR1-208	ENST00000617399	SETD2	Q9BYW2	2564 aa	Predicted RBP	-2.41	□□□□□ -2.79
NBR1-208	ENST00000617399	TRGV1	A0A0A0MS02	117 aa		-2.41	□□□□□ -2.8
NBR1-208	ENST00000617399	PPDPFL	Q8WWR9	84 aa		-2.41	□□□□□ -2.8
NBR1-208	ENST00000617399	VPS25	Q9BRG1	176 aa		-2.41	□□□□□ -2.8
NBR1-208	ENST00000617399	TRAV13-1	A0A0B4J241	112 aa		-2.42	□□□□□ -2.8
NBR1-208	ENST00000617399	CRYGS	P22914	178 aa		-2.42	□□□□□ -2.8
NBR1-208	ENST00000617399	SSBP1	Q04837	148 aa	Known RBP	-2.42	□□□□□ -2.8
NBR1-208	ENST00000617399	CYP2G1P	Q6ZSU1	146 aa		-2.42	□□□□□ -2.8
NBR1-208	ENST00000617399	OR13C6P	Q8NH95	151 aa		-2.42	□□□□□ -2.8
NBR1-208	ENST00000617399	KIF13A	Q9H1H9	1805 aa		-2.42	□□□□□ -2.8
NBR1-208	ENST00000617399		H3BMG7	143 aa		-2.43	□□□□□ -2.8
NBR1-208	ENST00000617399	S100A6	P06703	90 aa		-2.43	□□□□□ -2.8
NBR1-208	ENST00000617399	CTXN2	P0C2S0	81 aa		-2.43	□□□□□ -2.8
NBR1-208	ENST00000617399	BASP1	P80723	227 aa	Known RBP	-2.43	□□□□□ -2.8
NBR1-208	ENST00000617399	RBM3	P98179	157 aa	Known RBP	-2.43	□□□□□ -2.8
NBR1-208	ENST00000617399	KIAA0100	Q14667	2235 aa	Known RBP	-2.44	□□□□□ -2.8
NBR1-208	ENST00000617399	PHIP	Q8WWQ0	1821 aa		-2.44	□□□□□ -2.8
NBR1-208	ENST00000617399	LOC730098	B7Z3J9	87 aa		-2.44	□□□□□ -2.8
NBR1-208	ENST00000617399	DHRS4L2	Q6PKH6	230 aa		-2.44	□□□□□ -2.8
NBR1-208	ENST00000617399		V9GYV3	84 aa		-2.44	□□□□□ -2.8
NBR1-208	ENST00000617399	URB1	O60287	2271 aa	Known RBP	-2.45	□□□□□ -2.8
NBR1-208	ENST00000617399	TRBV10-3	A0A0K0K1G6	114 aa		-2.45	□□□□□ -2.8
NBR1-208	ENST00000617399	CRYBA4	P53673	196 aa		-2.45	□□□□□ -2.8
NBR1-208	ENST00000617399	OR8B8	Q15620	311 aa		-2.45	□□□□□ -2.8
NBR1-208	ENST00000617399	COX7B2	Q8TF08	81 aa		-2.45	□□□□□ -2.8
NBR1-208	ENST00000617399	FER1L6	Q2WGJ9	1857 aa		-2.45	□□□□□ -2.8
NBR1-208	ENST00000617399	MAP1LC3B2	A6NCE7	125 aa		-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399	DEGS1	O15121	323 aa		-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399	IFNA1	P01562	189 aa		-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399	HBD	P02042	147 aa		-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399	S100A11	P31949	105 aa		-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399	SRP9	P49458	86 aa	Known RBP	-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399	LSM3	P62310	102 aa	Known RBP	-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399	ARAP1	Q96P48	1450 aa		-2.46	□□□□□ -2.8
NBR1-208	ENST00000617399		A0A1B0GW64	132 aa		-2.47	□□□□□ -2.8
NBR1-208	ENST00000617399	PPP5D1	E7EU14	171 aa		-2.47	□□□□□ -2.8

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms