RNA–Protein interactions for RNA: ENST00000617399.1

NBR1-208, Transcript of NBR1, autophagy cargo receptor, humanhuman

Gene NBR1, Length 63 nt, Biotype misc RNA, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-208ENST00000617399 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
NBR1-208ENST00000617399 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
NBR1-208ENST00000617399 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
NBR1-208ENST00000617399 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
NBR1-208ENST00000617399 FOXD1Q16676 465 aa19.1■□□□□ 0.65
NBR1-208ENST00000617399 PLPPR3Q6T4P5 718 aa18.53■□□□□ 0.56
NBR1-208ENST00000617399 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
NBR1-208ENST00000617399 ADRA2BP18089 450 aa18■□□□□ 0.47
NBR1-208ENST00000617399 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
NBR1-208ENST00000617399 MSH5O43196 834 aa17.74■□□□□ 0.43
NBR1-208ENST00000617399 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
NBR1-208ENST00000617399 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
NBR1-208ENST00000617399 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
NBR1-208ENST00000617399 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
NBR1-208ENST00000617399 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
NBR1-208ENST00000617399 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
NBR1-208ENST00000617399 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
NBR1-208ENST00000617399 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
NBR1-208ENST00000617399 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
NBR1-208ENST00000617399 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
NBR1-208ENST00000617399 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
NBR1-208ENST00000617399 KCNA4P22459 653 aa15.44■□□□□ 0.06
NBR1-208ENST00000617399 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
NBR1-208ENST00000617399 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
NBR1-208ENST00000617399 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
NBR1-208ENST00000617399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
NBR1-208ENST00000617399 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
NBR1-208ENST00000617399 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
NBR1-208ENST00000617399 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
NBR1-208ENST00000617399 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
NBR1-208ENST00000617399 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
NBR1-208ENST00000617399 CAPN15O75808 1086 aa14.44□□□□□ -0.1
NBR1-208ENST00000617399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
NBR1-208ENST00000617399 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
NBR1-208ENST00000617399 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
NBR1-208ENST00000617399 DSG3P32926 999 aa14.31□□□□□ -0.12
NBR1-208ENST00000617399 APLP2Q06481 763 aa14.31□□□□□ -0.12
NBR1-208ENST00000617399 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
NBR1-208ENST00000617399 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
NBR1-208ENST00000617399 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
NBR1-208ENST00000617399 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
NBR1-208ENST00000617399 ZBTB22O15209 634 aa14.21□□□□□ -0.13
NBR1-208ENST00000617399 ABCB7O75027 752 aa14.15□□□□□ -0.14
NBR1-208ENST00000617399 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
NBR1-208ENST00000617399 POLA2Q14181 598 aa13.94□□□□□ -0.18
NBR1-208ENST00000617399 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
NBR1-208ENST00000617399 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
NBR1-208ENST00000617399 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
NBR1-208ENST00000617399 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
NBR1-208ENST00000617399 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
NBR1-208ENST00000617399 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
NBR1-208ENST00000617399 FBLN2P98095 1184 aa13.4□□□□□ -0.26
NBR1-208ENST00000617399 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
NBR1-208ENST00000617399 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
NBR1-208ENST00000617399 POTEHQ6S545 545 aa13.34□□□□□ -0.27
NBR1-208ENST00000617399 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
NBR1-208ENST00000617399 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
NBR1-208ENST00000617399 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
NBR1-208ENST00000617399 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
NBR1-208ENST00000617399 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
NBR1-208ENST00000617399 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
NBR1-208ENST00000617399 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
NBR1-208ENST00000617399 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
NBR1-208ENST00000617399 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
NBR1-208ENST00000617399 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
NBR1-208ENST00000617399 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
NBR1-208ENST00000617399 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
NBR1-208ENST00000617399 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
NBR1-208ENST00000617399 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
NBR1-208ENST00000617399 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
NBR1-208ENST00000617399 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
NBR1-208ENST00000617399 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
NBR1-208ENST00000617399 HAX1O00165 279 aa12.68□□□□□ -0.38
NBR1-208ENST00000617399 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
NBR1-208ENST00000617399 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
NBR1-208ENST00000617399 EVX2Q03828 476 aa12.58□□□□□ -0.4
NBR1-208ENST00000617399 PROM2Q8N271 834 aa12.56□□□□□ -0.4
NBR1-208ENST00000617399 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
NBR1-208ENST00000617399 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
NBR1-208ENST00000617399 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
NBR1-208ENST00000617399 FKBP8Q14318 412 aa12.45□□□□□ -0.42
NBR1-208ENST00000617399 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
NBR1-208ENST00000617399 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
NBR1-208ENST00000617399 GABBR2O75899 941 aa12.28□□□□□ -0.44
NBR1-208ENST00000617399 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
NBR1-208ENST00000617399 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
NBR1-208ENST00000617399 MIER1Q8N108 512 aa12.22□□□□□ -0.45
NBR1-208ENST00000617399 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
NBR1-208ENST00000617399 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
NBR1-208ENST00000617399 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
NBR1-208ENST00000617399 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
NBR1-208ENST00000617399 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
NBR1-208ENST00000617399 CLCN6P51797 869 aa12.1□□□□□ -0.47
NBR1-208ENST00000617399 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
NBR1-208ENST00000617399 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
NBR1-208ENST00000617399 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
NBR1-208ENST00000617399 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
NBR1-208ENST00000617399 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
NBR1-208ENST00000617399 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
NBR1-208ENST00000617399 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms