RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZNF415Q09FC8 603 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 RRN3P1Q2M238 152 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 RNF183Q96D59 192 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 TP53TG1Q9Y2A0 90 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 V9GYV3 84 aa8.71□□□□□ -1.02
SHKBP1-213ENST00000597325 GRIFINA4D1Z8 144 aa8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 MED14OSP0DP75 135 aa8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 OR11H2Q8NH07 326 aa8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 TSKUQ8WUA8 353 aa8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 TMEM263Q8WUH6 116 aaKnown RBP8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 C16orf74Q96GX8 76 aa8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 TPPP3Q9BW30 176 aa8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 TIMM8BQ9Y5J9 83 aaPredicted RBP8.7□□□□□ -1.02
SHKBP1-213ENST00000597325 H3BVH4 76 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 GZMBP10144 247 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 S100PP25815 95 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 TCL1AP56279 114 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 KCNIP4Q6PIL6 250 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 ZNF493Q6ZR52 646 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 FER1L6-AS1Q8NA97 138 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 BORCS7Q96B45 105 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 NEU1Q99519 415 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 GFRA4Q9GZZ7 299 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 TP53TG3Q9ULZ0 132 aa8.69□□□□□ -1.02
SHKBP1-213ENST00000597325 IGHV3-16A0A0C4DH30 117 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 A0A1W2PPQ1 181 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 SNURFLB1AK76 121 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 GNRH2O43555 120 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 MIFP14174 115 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 RETNQ9HD89 108 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 TMEM242Q9NWH2 141 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 NAT8BQ9UHF3 227 aa8.68□□□□□ -1.02
SHKBP1-213ENST00000597325 FAM231BA6NCW3 169 aa8.67□□□□□ -1.02
SHKBP1-213ENST00000597325 DNLZQ5SXM8 178 aa8.67□□□□□ -1.02
SHKBP1-213ENST00000597325 ATRAIDQ6UW56 229 aa8.67□□□□□ -1.02
SHKBP1-213ENST00000597325 RNASE8Q8TDE3 154 aaKnown RBP8.67□□□□□ -1.02
SHKBP1-213ENST00000597325 IMMP2LQ96T52 175 aa8.67□□□□□ -1.02
SHKBP1-213ENST00000597325 OVOL2Q9BRP0 275 aa8.67□□□□□ -1.02
SHKBP1-213ENST00000597325 X6R8D5 127 aa8.67□□□□□ -1.02
SHKBP1-213ENST00000597325 SMIM27A0A1W2PRY6 76 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 F2Z2F3 143 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 PRM2P04554 102 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 ARMS2P0C7Q2 107 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 AZU1P20160 251 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 CTRLP40313 264 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 GSN-AS1Q9NRJ2 163 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 MDFICQ9P1T7 246 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 PHLDA3Q9Y5J5 127 aa8.66□□□□□ -1.02
SHKBP1-213ENST00000597325 IGHV4-28A0A0C4DH34 117 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 CXorf65A6NEN9 183 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 EMP1P54849 157 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 LYZL1Q6UWQ5 148 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 SYT8Q8NBV8 401 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 C9orf85Q96MD7 179 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 SPXQ9BT56 116 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 SMCO4Q9NRQ5 59 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 URGCP-MRPS24S4R325 110 aa8.65□□□□□ -1.02
SHKBP1-213ENST00000597325 SNAI2O43623 268 aa8.64□□□□□ -1.03
SHKBP1-213ENST00000597325 FAM3BP58499 235 aaPredicted RBP8.64□□□□□ -1.03
SHKBP1-213ENST00000597325 CACNG7P62955 275 aa8.64□□□□□ -1.03
SHKBP1-213ENST00000597325 SPANXN1Q5VSR9 72 aa8.64□□□□□ -1.03
SHKBP1-213ENST00000597325 ZFP82Q8N141 532 aa8.64□□□□□ -1.03
SHKBP1-213ENST00000597325 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
SHKBP1-213ENST00000597325 TRAV9-1A0A075B6T8 112 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 MUC21A0A0G2JKD1 596 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 MUC21A0A140T8X8 626 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 A0A1B0GUT8 65 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 M0R2P5 195 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 M0R381 172 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 RIGQ13278 110 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 TMEM88Q6PEY1 159 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 CBLN2Q8IUK8 224 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 Q8NAQ8 132 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 OR10AG1Q8NH19 301 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 BTF3L4Q96K17 158 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
SHKBP1-213ENST00000597325 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 TEX48A0A1B0GUV7 120 aa8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 SSTP61278 116 aa8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 DAZ2Q13117 558 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 TWIST1Q15672 202 aa8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 C11orf68Q9H3H3 251 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 NOP10Q9NPE3 64 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-213ENST00000597325 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
SHKBP1-213ENST00000597325 LYRM9A8MSI8 78 aa8.61□□□□□ -1.03
SHKBP1-213ENST00000597325 DEFB4AO15263 64 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms