RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 RABL2BQ9UNT1 228 aa3.85□□□□□ -1.79
DNMT1-222ENST00000590619 LENEPQ9Y5L5 61 aa3.85□□□□□ -1.79
DNMT1-222ENST00000590619 TRBV6-8A0A0A6YYG3 113 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 DUXBA0A1W2PPF3 345 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 NOL3O60936 208 aaKnown RBP3.84□□□□□ -1.79
DNMT1-222ENST00000590619 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 NBEAP1P0C6P0 100 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 RNASE3P12724 160 aaKnown RBP3.84□□□□□ -1.79
DNMT1-222ENST00000590619 CLVS1Q8IUQ0 354 aaPredicted RBP3.84□□□□□ -1.79
DNMT1-222ENST00000590619 OR1L4Q8NGR5 311 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 TRIM63Q969Q1 353 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 KCNS1Q96KK3 526 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 KRTAP4-1Q9BYQ7 146 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 C11orf21Q9P2W6 132 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 MGAT4CQ9UBM8 478 aa3.84□□□□□ -1.79
DNMT1-222ENST00000590619 A8MWV9 139 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 ANXA3P12429 323 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 CAMLGP49069 296 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 RAB5CP51148 216 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 NRARPQ7Z6K4 114 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 FER1L6-AS1Q8NA97 138 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 SUN5Q8TC36 379 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 FAM167A-AS1Q96KT0 104 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 CDIP1Q9H305 208 aa3.83□□□□□ -1.8
DNMT1-222ENST00000590619 TRAV1-1A0A0B4J248 108 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 FAM25AB3EWG3 89 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 FAM25CB3EWG5 89 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 FAM25GB3EWG6 89 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 H3BMQ9 156 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 CSN1S1P47710 185 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 TMBIM6P55061 237 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 UBE2D3P61077 147 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 LSM3P62310 102 aaKnown RBP3.82□□□□□ -1.8
DNMT1-222ENST00000590619 RANP62826 216 aaKnown RBP3.82□□□□□ -1.8
DNMT1-222ENST00000590619 UBE2D2P62837 147 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 RBX1P62877 108 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 LGALSLQ3ZCW2 172 aaPredicted RBP3.82□□□□□ -1.8
DNMT1-222ENST00000590619 C1orf137Q5JT78 98 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 DIRC1Q969H9 104 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 SCGB3A2Q96PL1 93 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 PFDN5Q99471 154 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 PRRT1Q99946 306 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 GGACTQ9BVM4 153 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 SLC25A2Q9BXI2 301 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 NAA50Q9GZZ1 169 aaKnown RBP3.82□□□□□ -1.8
DNMT1-222ENST00000590619 LINC00474Q9P2X8 69 aa3.82□□□□□ -1.8
DNMT1-222ENST00000590619 TRBV7-3A0A075B6L6 115 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 PIGBOS1A0A0B4J2F0 54 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 A0A1W2PNN7 141 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 F6UZH7 168 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 H0Y9J4 135 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 SSSCA1O60232 199 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 MT-ND6P03923 174 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 IGLV7-43P04211 117 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 AKAIN1P0CW23 69 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 RPL29P47914 159 aaKnown RBP3.81□□□□□ -1.8
DNMT1-222ENST00000590619 ZNF80P51504 273 aaPredicted RBP3.81□□□□□ -1.8
DNMT1-222ENST00000590619 REG3AQ06141 175 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 NTM-AS1Q6ZSK4 140 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 C15orf56Q8N910 161 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 DYNC2LI1Q8TCX1 351 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 TMED6Q8WW62 240 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 FXYD5Q96DB9 178 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 PHYHIPLQ96FC7 376 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 BCL7BQ9BQE9 202 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 CHCHD5Q9BSY4 110 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 FUNDC2Q9BWH2 189 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 TREM1Q9NP99 234 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 EXTL2Q9UBQ6 330 aa3.81□□□□□ -1.8
DNMT1-222ENST00000590619 TRAV8-4A0A0B4J246 113 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 TSC22D2O75157 780 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 PTTG1O95997 202 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 P01737 135 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 MBPP02686 304 aaPredicted RBP3.8□□□□□ -1.8
DNMT1-222ENST00000590619 GZMBP10144 247 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 CRYGAP11844 174 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 RPL36AP83881 106 aaKnown RBP3.8□□□□□ -1.8
DNMT1-222ENST00000590619 SSBP1Q04837 148 aaKnown RBP3.8□□□□□ -1.8
DNMT1-222ENST00000590619 SPCS2Q15005 226 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 HIGD2BQ4VC39 106 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 GCSAMLQ5JQS6 135 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 PIK3CD-AS1Q5SR53 167 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 MIR17HGQ75NE6 70 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 ARL6IP6Q8N6S5 226 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 RPL36ALQ969Q0 106 aaKnown RBP3.8□□□□□ -1.8
DNMT1-222ENST00000590619 DIRAS2Q96HU8 199 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 WDR83OSQ9Y284 106 aa3.8□□□□□ -1.8
DNMT1-222ENST00000590619 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
DNMT1-222ENST00000590619 TRBV10-1A0A0K0K1A3 114 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 SFT2D2O95562 160 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 RPL13AP40429 203 aaKnown RBP3.79□□□□□ -1.8
DNMT1-222ENST00000590619 UBE2D1P51668 147 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 GAGE6Q13070 117 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 CTF1Q16619 201 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 TMEM128Q5BJH2 165 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 CFAP161Q6P656 301 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 C20orf203Q8NBC4 194 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 C15orf40Q8WUR7 153 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 NMES1Q9C002 83 aa3.79□□□□□ -1.8
DNMT1-222ENST00000590619 RABL2AQ9UBK7 228 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms