RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 C20orf173Q96LM9 149 aa7.59□□□□□ -1.19
TRAPPC8-211ENST00000582539 HIGD1BQ9P298 99 aa7.59□□□□□ -1.19
TRAPPC8-211ENST00000582539 ANKRD11Q6UB99 2663 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC8-211ENST00000582539 J3QR89 54 aa7.59□□□□□ -1.2
TRAPPC8-211ENST00000582539 NMUP48645 174 aa7.59□□□□□ -1.2
TRAPPC8-211ENST00000582539 C2orf66Q6UXQ4 117 aa7.59□□□□□ -1.2
TRAPPC8-211ENST00000582539 GEMIN7Q9H840 131 aaKnown RBP7.59□□□□□ -1.2
TRAPPC8-211ENST00000582539 SNCGO76070 127 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 IGKV3-20P01619 116 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 POM121L12Q8N7R1 296 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 LINC01006Q8NI28 216 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 DLX4Q92988 240 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 A0A1W2PRX2 142 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 SDHAF1A6NFY7 115 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 SCGB1D4Q6XE38 83 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 LURAP1LQ8IV03 231 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 DOPEY1Q5JWR5 2465 aa7.58□□□□□ -1.2
TRAPPC8-211ENST00000582539 TRGV2A0A075B6R0 118 aa7.57□□□□□ -1.2
TRAPPC8-211ENST00000582539 TRAV4A0A0B4J268 109 aa7.57□□□□□ -1.2
TRAPPC8-211ENST00000582539 CCL25O15444 150 aa7.57□□□□□ -1.2
TRAPPC8-211ENST00000582539 GDF5OSQ5U4N7 250 aa7.57□□□□□ -1.2
TRAPPC8-211ENST00000582539 RIPPLY3P57055 190 aa7.57□□□□□ -1.2
TRAPPC8-211ENST00000582539 CD300EQ496F6 205 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC8-211ENST00000582539 TIMM21Q9BVV7 248 aa7.57□□□□□ -1.2
TRAPPC8-211ENST00000582539 RNF224P0DH78 156 aa7.56□□□□□ -1.2
TRAPPC8-211ENST00000582539 KRTAP10-9P60411 292 aa7.56□□□□□ -1.2
TRAPPC8-211ENST00000582539 NEGR1Q7Z3B1 354 aa7.56□□□□□ -1.2
TRAPPC8-211ENST00000582539 RNF185Q96GF1 192 aa7.56□□□□□ -1.2
TRAPPC8-211ENST00000582539 TRGV4A0A0C4DH28 118 aa7.56□□□□□ -1.2
TRAPPC8-211ENST00000582539 CITED2Q99967 270 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC8-211ENST00000582539 NCOR2Q9Y618 2525 aa7.56□□□□□ -1.2
TRAPPC8-211ENST00000582539 KNCNA6PVL3 124 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 AZU1P20160 251 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 PYGO1Q9Y3Y4 419 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 RS1O15537 224 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 Q6ZVH6 145 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 ORAOV1Q8WV07 137 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 RASL10AQ92737 203 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 LYRM9A8MSI8 78 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 Q8N1Y9 231 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 CACNA1AO00555 2505 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 NAV3Q8IVL0 2385 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 TRBV27A0A0K0K1C4 114 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 TMEM238C9JI98 176 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 CD28P10747 220 aa7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 ZNF25P17030 456 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC8-211ENST00000582539 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 CRLF1O75462 422 aa7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 IGLV1-51P01701 117 aa7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 HTN1P15515 57 aa7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 LY6G6DO95868 133 aa7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
TRAPPC8-211ENST00000582539 GNRH2O43555 120 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 CTAG1AP78358 180 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 MDFICQ9P1T7 246 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 CBY1Q9Y3M2 126 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 VAMP3Q15836 100 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 F6UB75 175 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 OR5A1Q8NGJ0 315 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 NBASA2RRP1 2371 aa7.53□□□□□ -1.2
TRAPPC8-211ENST00000582539 IGHV3-53P01767 116 aa7.52□□□□□ -1.2
TRAPPC8-211ENST00000582539 BEAN1Q3B7T3 259 aa7.52□□□□□ -1.2
TRAPPC8-211ENST00000582539 C18orf15Q96N68 181 aa7.52□□□□□ -1.2
TRAPPC8-211ENST00000582539 TP53TG1Q9Y2A0 90 aa7.52□□□□□ -1.2
TRAPPC8-211ENST00000582539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.52□□□□□ -1.29e-7■■■■□ 20.5
TRAPPC8-211ENST00000582539 TRBV25-1A0A075B6N4 114 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 HERVK_113P63121 156 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 MUC21A0A0G2JKD1 596 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 MUC21A0A140T8X8 626 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 SMKR1H3BMG3 65 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 K7EQD1 137 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 FABP2P12104 132 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 RNASE3P12724 160 aaKnown RBP7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 PROK1P58294 105 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 RPL24P83731 157 aaKnown RBP7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 NRACQ8N912 160 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 HIST1H4GQ99525 98 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 TMEM243Q9BU79 118 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 C14orf144Q96I85 54 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 ACACBO00763 2458 aa7.52□□□□□ -1.21
TRAPPC8-211ENST00000582539 CEP295Q9C0D2 2601 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 C11orf86A6NJI1 115 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 COX6CP09669 75 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 Q6ZS46 218 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 NUPR1O60356 82 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 TMEM170BQ5T4T1 132 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
TRAPPC8-211ENST00000582539 AKAP6Q13023 2319 aa7.5□□□□□ -1.21
TRAPPC8-211ENST00000582539 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
TRAPPC8-211ENST00000582539 C3orf56Q8N813 242 aa7.5□□□□□ -1.21
TRAPPC8-211ENST00000582539 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
TRAPPC8-211ENST00000582539 TRBV6-4A0A1B0GX49 114 aa7.5□□□□□ -1.21
TRAPPC8-211ENST00000582539 ZC2HC1BQ5TFG8 222 aa7.5□□□□□ -1.21
TRAPPC8-211ENST00000582539 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 364.6 ms