RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 LGALS9O00182 355 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 TAX1BP3O14907 124 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 NDUFB3O43676 98 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 SYNGR2O43760 224 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 P0C879 139 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 TRGC1P0CF51 173 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 CRYGAP11844 174 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 FABP2P12104 132 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 LGALS3P17931 250 aaKnown RBP2.68□□□□□ -1.98
SMG6-208ENST00000570874 CXCL5P42830 114 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 INSL3P51460 131 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 DYNLT3P51808 116 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 Q0VG73 95 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 TMEM155Q4W5P6 130 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 MUC21Q5SSG8 566 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 LINC01545Q5VT33 79 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 MORN5Q5VZ52 161 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 RUSC1-AS1Q66K80 236 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 SLC25A34Q6PIV7 304 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 UNQ9165/PRO28630Q6UXU0 137 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 C6orf223Q8N319 242 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 ZNF491Q8N8L2 437 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 CYB561D1Q8N8Q1 229 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 DDB2Q92466 427 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 FAM218AQ96MZ4 157 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 ZNF714Q96N38 554 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 LY96Q9Y6Y9 160 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 ARL2-SNX15V9GYD0 113 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 CHD8Q9HCK8 2581 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 ANKHD1Q8IWZ3 2542 aaKnown RBP2.67□□□□□ -1.98
SMG6-208ENST00000570874 TRBV20OR9-2A0A075B6H5 130 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 IGHV3-72A0A0B4J1Y9 119 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 IGHV4-61A0A0C4DH41 118 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 EPM2AB3EWF7 344 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 M0R2P5 195 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 DUSP14O95147 198 aaKnown RBP2.67□□□□□ -1.98
SMG6-208ENST00000570874 IGHV4-39P01824 125 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 IGHV4-59P01825 116 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 TRACP01848 142 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 FRMD6-AS1P0C7T7 363 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 ZNF705DP0CH99 300 aaPredicted RBP2.67□□□□□ -1.98
SMG6-208ENST00000570874 SCGB1C2P0DMR2 95 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 EGR2P11161 476 aaPredicted RBP2.67□□□□□ -1.98
SMG6-208ENST00000570874 COX7A1P24310 79 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 NMUP48645 174 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 SYNJ2BPP57105 145 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 GNB2P62879 340 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 ADIRFQ15847 76 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 TDRG1Q3Y452 100 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 HCP5Q6MZN7 132 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 LCA10Q71F78 164 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 GTSCR1Q86UQ5 136 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 RPP25LQ8N5L8 163 aaKnown RBP2.67□□□□□ -1.98
SMG6-208ENST00000570874 LINC00311Q8N616 119 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 RNF182Q8N6D2 247 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 ZNF525Q8N782 197 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 Q8N7P7 452 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 NEXN-AS1Q8NBZ9 246 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 OR10P1Q8NGE3 313 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 TAF15Q92804 592 aaKnown RBP eCLIP2.67□□□□□ -1.98
SMG6-208ENST00000570874 SMIM7Q9BQ49 75 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 ZNF747Q9BV97 191 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 AGPAT4-IT1Q9H0P7 198 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 LINC00574Q9H8X3 128 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 C21orf62Q9NYP8 219 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 PSENENQ9NZ42 101 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 MSRB1Q9NZV6 116 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 GNG13Q9P2W3 67 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 KAAG1Q9UBP8 84 aa2.67□□□□□ -1.98
SMG6-208ENST00000570874 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.67□□□□□ -1.98
SMG6-208ENST00000570874 ABCA1O95477 2261 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 CEP295Q9C0D2 2601 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 USP24Q9UPU5 2620 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 PIEZO1Q92508 2521 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 IGLV5-45A0A087WSX0 123 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 TRAV41A0A0B4J266 112 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 PMS2P5A8MQ11 134 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 CEBPZOSA8MTT3 80 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 A8MUN3 132 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 ZNF705FA8MVS1 300 aaPredicted RBP2.66□□□□□ -1.98
SMG6-208ENST00000570874 E7EUB6 86 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 LST1O00453 97 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 COX7A2P2O60397 106 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 MT-ATP8P03928 68 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 IGKV1-16P04430 117 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 PRSS1P07477 247 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 CXCL1P09341 107 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 LINC00869P0C866 280 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 ZNF705BP0CI00 300 aaPredicted RBP2.66□□□□□ -1.98
SMG6-208ENST00000570874 IGHV1-8P0DP01 117 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 HLA-DRB4P13762 266 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 ZFP36P26651 326 aaKnown RBP2.66□□□□□ -1.98
SMG6-208ENST00000570874 IL3RAP26951 378 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 ASIPP42127 132 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 KRTAP10-9P60411 292 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 YPEL3P61236 119 aaPredicted RBP2.66□□□□□ -1.98
SMG6-208ENST00000570874 ERVK-16P61578 105 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 CCL20P78556 96 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 MRGPRG-AS1Q2M3A8 158 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 KRTAP19-4Q3LI73 84 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms