RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PTPRDP23468 1912 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 GREB1Q4ZG55 1949 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 SPAARA0A1B0GVQ0 90 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 LECT2O14960 151 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 WDR86Q86TI4 376 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 ODF3L1Q8IXM7 274 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 SPRR3Q9UBC9 169 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 IGHV3-11P01762 117 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 IGHV3-30P01768 117 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 ELANEP08246 267 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 IGHV3-30-5P0DP03 117 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 CRYGAP11844 174 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 C5orf38Q86SI9 138 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 VWCEQ96DN2 955 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 MRPS12O15235 138 aaKnown RBP5.51□□□□□ -1.53
CNOT1-216ENST00000569240 IGLV11-55A0A075B6I3 123 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 IGHV4-4A0A075B6R2 117 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 LOXP28300 417 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-216ENST00000569240 IGHV3OR16-8A0A075B7F1 116 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 TMEM223A0PJW6 202 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 NDUFA1O15239 70 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 A0A0U1RQV1 116 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 GDF5OSQ5U4N7 250 aa5.51□□□□□ -1.53
CNOT1-216ENST00000569240 ZMAT4Q9H898 229 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 SDK1Q7Z5N4 2213 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 DEFB124Q8NES8 71 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 ATG2BQ96BY7 2078 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 FAM19A3Q7Z5A8 133 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 COL4A1P02462 1669 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 IBA57-AS1B1ANH7 110 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 K7EIM0 57 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 NDUFS5O43920 106 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 TRIAP1O43715 76 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 DKK1O94907 266 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 ATP5J2P56134 94 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 FGF23Q9GZV9 251 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-216ENST00000569240 C7orf69Q9H7B7 122 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 WT1P19544 449 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-216ENST00000569240 CLEC2BQ92478 149 aa5.5□□□□□ -1.53
CNOT1-216ENST00000569240 FDCSPQ8NFU4 85 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 MYO9BQ13459 2157 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 IGHV4OR15-8A0A075B7B6 117 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 A0A087WW49 117 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.49□□□□□ -1.53
CNOT1-216ENST00000569240 SEC61GP60059 68 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 PIK3CD-AS1Q5SR53 167 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 TRPM7Q96QT4 1865 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 BPY2O14599 106 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 LHBP01229 141 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 NRACQ8N912 160 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 DIRC1Q969H9 104 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 TTTY13Q9BZ97 58 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 ZNF295-AS1Q8N0V1 137 aa5.49□□□□□ -1.53
CNOT1-216ENST00000569240 MDC1Q14676 2089 aaKnown RBP5.48□□□□□ -1.53
CNOT1-216ENST00000569240 PINLYPA6NC86 204 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 IGLV2-14P01704 120 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 LINC00310P59036 64 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 OVOL3O00110 214 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 PRR31Q5SQ13 230 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 PLXNA2O75051 1894 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 DOCK8Q8NF50 2099 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 VPREB1P12018 145 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 TFF2Q03403 129 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 ATP6V0E1O15342 81 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 GATA1P15976 413 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-216ENST00000569240 LINC00205P59089 165 aa5.48□□□□□ -1.53
CNOT1-216ENST00000569240 SHANK1Q9Y566 2161 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 FSTL3O95633 263 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 TMEM263Q8WUH6 116 aaKnown RBP5.47□□□□□ -1.53
CNOT1-216ENST00000569240 RP1L1Q8IWN7 2480 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-216ENST00000569240 PIP4P2Q8N4L2 257 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 MSRB2Q9Y3D2 182 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 ESPL1Q14674 2120 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 CHKB-CPT1BH3BT56 60 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 C11orf53Q8IXP5 236 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 C14orf132Q9NPU4 83 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 ZNF22P17026 224 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-216ENST00000569240 HRCT1Q6UXD1 115 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 B4DSR2 109 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 NDPQ00604 133 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 RPL39LQ96EH5 51 aaKnown RBP5.47□□□□□ -1.53
CNOT1-216ENST00000569240 FNDC1Q4ZHG4 1894 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-216ENST00000569240 IGKV1OR2-108A0A075B7D4 117 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 TRBV27A0A0K0K1C4 114 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 CCL19Q99731 98 aa5.47□□□□□ -1.53
CNOT1-216ENST00000569240 SDIM1Q6ZPB5 146 aa5.46□□□□□ -1.53
CNOT1-216ENST00000569240 COX8CQ7Z4L0 72 aa5.46□□□□□ -1.53
CNOT1-216ENST00000569240 EP400Q96L91 3159 aa5.46□□□□□ -1.53
CNOT1-216ENST00000569240 IGFL4Q6B9Z1 124 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 NLRC5Q86WI3 1866 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 IGKV2D-26A0A0A0MRZ7 120 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 MSRB1Q9NZV6 116 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 FRMD6-AS1P0C7T7 363 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 MIFP14174 115 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 DEFB131AP59861 70 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms