RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 MYH9P35579 1960 aaKnown RBP-0.32□□□□□ -2.46
CDH1-211ENST00000567320 SYNMO15061 1565 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 MYH3P11055 1940 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 MYH2Q9UKX2 1941 aa-0.32□□□□□ -2.46
CDH1-211ENST00000567320 PRDM2Q13029 1718 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 FAM208BQ5VWN6 2430 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 CCDC171Q6TFL3 1326 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 F8P00451 2351 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 ERCC6Q03468 1493 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 IQSEC2Q5JU85 1478 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 VWFP04275 2813 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TRAV12-2A0A075B6T6 113 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TRBV7-1A0A0A6YYK4 115 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TRAV13-1A0A0B4J241 112 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 IGHV1-24A0A0C4DH33 117 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TRBV7-6A0A0J9YX20 115 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TRBV27A0A0K0K1C4 114 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TEX49A0A1B0GTD5 131 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 LOC107986453A0A1B0GWG9 222 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 IFITM5A6NNB3 132 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TMEM14DPA8MWL7 114 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 H7C1C5 153 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 AIPO00170 330 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 BCE1O60756 84 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 NDUFC2O95298 119 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 HBDP02042 147 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TCRAP04437 139 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 SLC25A5P05141 298 aaKnown RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TPT1P13693 172 aaKnown RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 RPL7P18124 248 aaKnown RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 HSD11B1P28845 292 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 SDC2P34741 201 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 POLR2HP52434 150 aaKnown RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 POLR2JP52435 117 aaKnown RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 MRPS36P82909 103 aaKnown RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 INSL4Q14641 139 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TMED2Q15363 201 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 RHOHQ15669 191 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 KLK9Q2XQG4 91 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 C9orf116Q5BN46 136 aaPredicted RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 SPAG11AQ6PDA7 123 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 UNQ5815/PRO19632Q6UWF5 114 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 CYP2G1PQ6ZSU1 146 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 LINC00305Q7Z4B0 112 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 C4orf33Q8N1A6 199 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 NEK7Q8TDX7 302 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 COX7B2Q8TF08 81 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 C10orf82Q8WW14 230 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 BTF3L4Q96K17 158 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 MCEEQ96PE7 176 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 SMIM7Q9BQ49 75 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 AGPAT4-IT1Q9H0P7 198 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 SH3BGRL3Q9H299 93 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 C19orf12Q9NSK7 152 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 CBLN4Q9NTU7 201 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 BET1LQ9NYM9 111 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 TRAPPC2LQ9UL33 140 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 PYCARDQ9ULZ3 195 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 SSR3Q9UNL2 185 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 KDM3BQ7LBC6 1761 aa-0.33□□□□□ -2.46
CDH1-211ENST00000567320 IBTKQ9P2D0 1353 aaPredicted RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 FLGP20930 4061 aaPredicted RBP-0.33□□□□□ -2.46
CDH1-211ENST00000567320 ABCA4P78363 2273 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 A2MP01023 1474 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 MRC1P22897 1456 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 MED13LQ71F56 2210 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 FXYD6-FXYD2A0A087WZ82 144 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 TRAV12-3A0A0B4J271 114 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 TRBV10-3A0A0K0K1G6 114 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 RBAKDNA6NC62 111 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 MAP1LC3B2A6NCE7 125 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 LOC730098B7Z3J9 87 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 MCRIP1C9JLW8 97 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 H3BQV1 296 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 M0R129 80 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 ADGRB1O14514 1584 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 DEGS1O15121 323 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 PITX3O75364 302 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 IFNA1P01562 189 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 APOA2P02652 100 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 SPINK8P0C7L1 97 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 SPRR1BP22528 89 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 CKS2P33552 79 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 UBE2D1P51668 147 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 AKR1D1P51857 326 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 CEBPGP53567 150 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 EDDM3BP56851 147 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 PCBD1P61457 104 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 KMT2AQ03164 3969 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 SCGB2B2Q4G0G5 96 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 CCSMST1Q4G0I0 132 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 TMEM78Q5T7P6 136 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 SLC48A1Q6P1K1 146 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 C3orf33Q6P1S2 294 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 SLC25A26Q70HW3 274 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 SNX29P2Q8IUI4 249 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 NUP35Q8NFH5 326 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 DYDC1Q8WWB3 177 aa-0.34□□□□□ -2.46
CDH1-211ENST00000567320 PHB2Q99623 299 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms