RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CTRLP40313 264 aa9.8□□□□□ -0.84
HMBOX1-213ENST00000560269 ZMAT4Q9H898 229 aa9.8□□□□□ -0.84
HMBOX1-213ENST00000560269 HIGD1CA8MV81 97 aa9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 SNURFLB1AK76 121 aa9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 F2Z2F3 143 aa9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 NHLRC4P0CG21 123 aaPredicted RBP9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 DAZ2Q13117 558 aaKnown RBP9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 NUP35Q8NFH5 326 aa9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 PTH2Q96A98 100 aa9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 NAT8BQ9UHF3 227 aa9.79□□□□□ -0.84
HMBOX1-213ENST00000560269 COL7A1Q02388 2944 aa9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 CXorf65A6NEN9 183 aa9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 WDR73Q6P4I2 378 aa9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 TENM3Q9P273 2699 aa9.78□□□□□ -0.84
HMBOX1-213ENST00000560269 MUC4Q99102 2169 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 IGHV4-4A0A075B6R2 117 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 M0R2P5 195 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 NXPH4O95158 308 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 CACNG7P62955 275 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 OR10AG1Q8NH19 301 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 PHLDA3Q9Y5J5 127 aa9.77□□□□□ -0.85
HMBOX1-213ENST00000560269 TRAV9-1A0A075B6T8 112 aa9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 DEFB4AO15263 64 aa9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 SPINK4O60575 86 aa9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 FAM3BP58499 235 aaPredicted RBP9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 LGALS9BQ3B8N2 356 aa9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 KCNIP4Q6PIL6 250 aa9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 NOP10Q9NPE3 64 aaKnown RBP9.76□□□□□ -0.85
HMBOX1-213ENST00000560269 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 S100PP25815 95 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 EMP1P54849 157 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 SPANXN1Q5VSR9 72 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 ZFP82Q8N141 532 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 LINC00612Q8N6U2 182 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 RASL10AQ92737 203 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 NDUFAF3Q9BU61 184 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 DKK2Q9UBU2 259 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 FBN3Q75N90 2809 aa9.75□□□□□ -0.85
HMBOX1-213ENST00000560269 MUC21A0A0G2JKD1 596 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 MUC21A0A140T8X8 626 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 NTF3P20783 257 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 Q6ZTI0 123 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 SYT8Q8NBV8 401 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 BORCS7Q96B45 105 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 SMCO4Q9NRQ5 59 aa9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 MRPL16Q9NX20 251 aaKnown RBP9.74□□□□□ -0.85
HMBOX1-213ENST00000560269 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 TEX48A0A1B0GUV7 120 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 M0R381 172 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 ELOBQ15370 118 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 TMEM88Q6PEY1 159 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 ATP5L2Q7Z4Y8 100 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 CBLN2Q8IUK8 224 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 YPEL4Q96NS1 127 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 MSRB1Q9NZV6 116 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 URGCP-MRPS24S4R325 110 aa9.73□□□□□ -0.85
HMBOX1-213ENST00000560269 A0A1B0GW15 77 aa9.72□□□□□ -0.85
HMBOX1-213ENST00000560269 A0A1B0GXF2 115 aa9.72□□□□□ -0.85
HMBOX1-213ENST00000560269 SCO1O75880 301 aa9.72□□□□□ -0.85
HMBOX1-213ENST00000560269 SPART-AS1P0CW21 52 aa9.72□□□□□ -0.85
HMBOX1-213ENST00000560269 RIGQ13278 110 aa9.72□□□□□ -0.85
HMBOX1-213ENST00000560269 C18orf15Q96N68 181 aa9.72□□□□□ -0.85
HMBOX1-213ENST00000560269 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
HMBOX1-213ENST00000560269 TRBV24-1A0A075B6N3 115 aa9.71□□□□□ -0.86
HMBOX1-213ENST00000560269 SSTP61278 116 aa9.71□□□□□ -0.86
HMBOX1-213ENST00000560269 TWIST1Q15672 202 aa9.71□□□□□ -0.86
HMBOX1-213ENST00000560269 GAGE12BA1L429 117 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 A8MWV9 139 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 RS1O15537 224 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 GAGE7O76087 117 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 TRGC1P0CF51 173 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 GAGE12FP0CL80 117 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 GAGE12GP0CL81 117 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 GAGE12IP0CL82 117 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 HBBP68871 147 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 MRPL54Q6P161 138 aaKnown RBP9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 GATD1Q8NB37 220 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 AP1S3Q96PC3 154 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 JPT2Q9H910 190 aa9.7□□□□□ -0.86
HMBOX1-213ENST00000560269 TGIF2-C20orf24A0A0A6YYL0 155 aa9.69□□□□□ -0.86
HMBOX1-213ENST00000560269 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
HMBOX1-213ENST00000560269 S100A8P05109 93 aa9.69□□□□□ -0.86
HMBOX1-213ENST00000560269 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
HMBOX1-213ENST00000560269 POM121L12Q8N7R1 296 aa9.69□□□□□ -0.86
HMBOX1-213ENST00000560269 U3KQK5 164 aa9.69□□□□□ -0.86
HMBOX1-213ENST00000560269 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 766.1 ms