RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
NEDD1-211ENST00000557454 ZFP2Q6ZN57 461 aa5.58□□□□□ -1.52
NEDD1-211ENST00000557454 SUN5Q8TC36 379 aa5.58□□□□□ -1.52
NEDD1-211ENST00000557454 ASB13Q8WXK3 278 aa5.58□□□□□ -1.52
NEDD1-211ENST00000557454 C9orf85Q96MD7 179 aa5.58□□□□□ -1.52
NEDD1-211ENST00000557454 CCDC59Q9P031 241 aaKnown RBP5.58□□□□□ -1.52
NEDD1-211ENST00000557454 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
NEDD1-211ENST00000557454 SMIM31A0A1B0GVY4 71 aa5.57□□□□□ -1.52
NEDD1-211ENST00000557454 CFC1BP0CG36 223 aa5.57□□□□□ -1.52
NEDD1-211ENST00000557454 RPL13AP40429 203 aaKnown RBP5.57□□□□□ -1.52
NEDD1-211ENST00000557454 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
NEDD1-211ENST00000557454 MGST2Q99735 147 aa5.57□□□□□ -1.52
NEDD1-211ENST00000557454 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
NEDD1-211ENST00000557454 GPN1Q9HCN4 374 aaPredicted RBP5.57□□□□□ -1.52
NEDD1-211ENST00000557454 TMEM14CQ9P0S9 112 aa5.57□□□□□ -1.52
NEDD1-211ENST00000557454 MGAT4CQ9UBM8 478 aa5.57□□□□□ -1.52
NEDD1-211ENST00000557454 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
NEDD1-211ENST00000557454 TRBV6-8A0A0A6YYG3 113 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 TRAV21A0A0B4J279 112 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 F6UZH7 168 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 TGFBR1P36897 503 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 UFSP1Q6NVU6 142 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 C15orf56Q8N910 161 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 KCNS1Q96KK3 526 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 JPT2Q9H910 190 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 LINC00474Q9P2X8 69 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 MTFP1Q9UDX5 166 aa5.56□□□□□ -1.52
NEDD1-211ENST00000557454 FNDC10F2Z333 226 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 PTTG1O95997 202 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 METTL15P1P0C7V9 234 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 RAB5CP51148 216 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 TAS2R19P59542 299 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 HIGD2BQ4VC39 106 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 MIC13Q5XKP0 118 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 CROCCP3Q8IVE0 287 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 ARL6IP6Q8N6S5 226 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 TMEM229BQ8NBD8 167 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 CHCHD5Q9BSY4 110 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 PSENENQ9NZ42 101 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 LENEPQ9Y5L5 61 aa5.55□□□□□ -1.52
NEDD1-211ENST00000557454 RBAKDNA6NC62 111 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 A8MWV9 139 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 APOA1P02647 267 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 IGLV7-43P04211 117 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 SLC25A6P12236 298 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 UBE2D3P61077 147 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 UBE2D2P62837 147 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 RBX1P62877 108 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 MT1HP80294 61 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 Q6ZRG5 221 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 OR1L4Q8NGR5 311 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 PTH2Q96A98 100 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 VCXQ9H320 206 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 COMMD3Q9UBI1 195 aa5.54□□□□□ -1.52
NEDD1-211ENST00000557454 DUXBA0A1W2PPF3 345 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 ANXA3P12429 323 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 AQP4P55087 323 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
NEDD1-211ENST00000557454 CYCSP99999 105 aaKnown RBP5.53□□□□□ -1.52
NEDD1-211ENST00000557454 REG3AQ06141 175 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 LGALSLQ3ZCW2 172 aaPredicted RBP5.53□□□□□ -1.52
NEDD1-211ENST00000557454 C12orf45Q8N5I9 185 aaPredicted RBP5.53□□□□□ -1.52
NEDD1-211ENST00000557454 PHYHIPLQ96FC7 376 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 PFDN5Q99471 154 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 C11orf21Q9P2W6 132 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 BLOC1S6Q9UL45 172 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 RABL2BQ9UNT1 228 aa5.53□□□□□ -1.52
NEDD1-211ENST00000557454 DISC1C4P0D8 188 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 SSSCA1O60232 199 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 RNASE3P12724 160 aaKnown RBP5.52□□□□□ -1.53
NEDD1-211ENST00000557454 CSN1S1P47710 185 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 CAMLGP49069 296 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 PKIAP61925 76 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 ARL16Q0P5N6 197 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 TMEM14EPQ6UXP3 125 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 MLST8Q9BVC4 326 aa5.52□□□□□ -1.53
NEDD1-211ENST00000557454 HPGDSO60760 199 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 NBEAP1P0C6P0 100 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 RPL36AP83881 106 aaKnown RBP5.51□□□□□ -1.53
NEDD1-211ENST00000557454 GAGE6Q13070 117 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 FAM74A4Q5TZK3 123 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 PRR27Q6MZM9 219 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 NRARPQ7Z6K4 114 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 RPL36ALQ969Q0 106 aaKnown RBP5.51□□□□□ -1.53
NEDD1-211ENST00000557454 TVP23CQ96ET8 276 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 SLC25A2Q9BXI2 301 aa5.51□□□□□ -1.53
NEDD1-211ENST00000557454 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 A0A1W2PNN7 141 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 RHODO00212 210 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 P01737 135 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 AMTP48728 403 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 S100A10P60903 97 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 FAM162BQ5T6X4 162 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 TMED6Q8WW62 240 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 DIRAS2Q96HU8 199 aa5.5□□□□□ -1.53
NEDD1-211ENST00000557454 TRBV7-3A0A075B6L6 115 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms