RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RNF114Q9Y508 228 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 TMSB15BA0A087X1C1 80 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 ZNF324O75467 553 aaPredicted RBP6.61□□□□□ -1.35
TDP1-210ENST00000554976 KRTDAPP60985 99 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 RIGQ13278 110 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 IGKV3-7A0A075B6H7 116 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 GPX1P07203 203 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 OR5AL1P0C617 328 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 AZU1P20160 251 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
TDP1-210ENST00000554976 PMCHL1Q16048 86 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 NEGR1Q7Z3B1 354 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 MED14OSP0DP75 135 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 UFSP1Q6NVU6 142 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 KCNS1Q96KK3 526 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 CCL24O00175 119 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 NXPH4O95158 308 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 ZNF688P0C7X2 276 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 CKS1BP61024 79 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 PSMG4Q5JS54 123 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 FOXI2Q6ZQN5 318 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 TMEM61Q8N0U2 210 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 SIGMAR1Q99720 223 aa6.6□□□□□ -1.35
TDP1-210ENST00000554976 RBMY1BA6NDE4 496 aaKnown RBP6.59□□□□□ -1.35
TDP1-210ENST00000554976 RBMY1EA6NEQ0 496 aaKnown RBP6.59□□□□□ -1.35
TDP1-210ENST00000554976 RBMY1DP0C7P1 496 aaKnown RBP6.59□□□□□ -1.35
TDP1-210ENST00000554976 FAM104BQ5XKR9 115 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 MTURNQ8N3F0 131 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 JMJD8Q96S16 334 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 MSRB1Q9NZV6 116 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 TRAV21A0A0B4J279 112 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 LINC01546A6NGU7 62 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 ORM1P02763 201 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 RNASE3P12724 160 aaKnown RBP6.59□□□□□ -1.35
TDP1-210ENST00000554976 NTF3P20783 257 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 WFDC3Q8IUB2 231 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 TMEM191AQ9H0A3 160 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 CMYA5Q8N3K9 4069 aa6.59□□□□□ -1.35
TDP1-210ENST00000554976 CRLF1O75462 422 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 SNRPD3P62318 126 aaKnown RBP6.58□□□□□ -1.36
TDP1-210ENST00000554976 ERASQ7Z444 233 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 TRAV25A0A0B4J276 109 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 CRXO43186 299 aaPredicted RBP6.58□□□□□ -1.36
TDP1-210ENST00000554976 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
TDP1-210ENST00000554976 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 ODF1Q14990 250 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
TDP1-210ENST00000554976 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 BVES-AS1Q5T3Y7 98 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 BAGE3Q86Y29 109 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 OR10AG1Q8NH19 301 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 MAP6D1Q9H9H5 199 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 TRAV9-2A0A087WT02 112 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 TSPAN13O95857 204 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 HLA-DRB4P13762 266 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 LEPP41159 167 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 CD300EQ496F6 205 aaPredicted RBP6.58□□□□□ -1.36
TDP1-210ENST00000554976 MRPL51Q4U2R6 128 aaKnown RBP6.58□□□□□ -1.36
TDP1-210ENST00000554976 C12orf54Q6X4T0 127 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 DPF1Q92782 380 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 HLA-DRB4X5D2U9 266 aa6.58□□□□□ -1.36
TDP1-210ENST00000554976 HECTD1Q9ULT8 2610 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 TRAV8-6A0A0B4J262 113 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 C3orf79P0CE67 100 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 RNASE4P34096 147 aaKnown RBP6.57□□□□□ -1.36
TDP1-210ENST00000554976 MPV17L2Q567V2 206 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 C11orf44Q8N8P7 122 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 MUC21A0A0G2JKD1 596 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 MUC21A0A140T8X8 626 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 C7orf71A4D174 169 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 MUC21Q5SSG8 566 aa6.57□□□□□ -1.36
TDP1-210ENST00000554976 MUC4Q99102 2169 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 NF1P21359 2839 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 A0A1W2PRX2 142 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 GAGE10A6NGK3 116 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 H3BMM0 161 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 SMAGPQ0VAQ4 97 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 KHDC1LQ5JSQ8 128 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 NDUFA11Q86Y39 141 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 SPAG8Q99932 426 aaPredicted RBP6.56□□□□□ -1.36
TDP1-210ENST00000554976 H0Y8G0 127 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 GAS8-AS1O95177 125 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 CACNG7P62955 275 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 ODF3L2Q3SX64 289 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 MRAP2Q96G30 205 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 C9orf85Q96MD7 179 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 TPPP3Q9BW30 176 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 MYO9AB2RTY4 2548 aa6.56□□□□□ -1.36
TDP1-210ENST00000554976 OR11H12B2RN74 326 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 GNRH2O43555 120 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 DUSP14O95147 198 aaKnown RBP6.55□□□□□ -1.36
TDP1-210ENST00000554976 AMTP48728 403 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 TWIST1Q15672 202 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 OR11H2Q8NH07 326 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms