RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 C11orf72Q8NBR9 251 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 PTH2Q96A98 100 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 OVOL2Q9BRP0 275 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 C11orf68Q9H3H3 251 aaKnown RBP10.48□□□□□ -0.73
SHMT2-210ENST00000553950 TIMM8BQ9Y5J9 83 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-210ENST00000553950 GNRH2O43555 120 aa10.47□□□□□ -0.73
SHMT2-210ENST00000553950 ARMS2P0C7Q2 107 aa10.47□□□□□ -0.73
SHMT2-210ENST00000553950 NHLRC4P0CG21 123 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-210ENST00000553950 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
SHMT2-210ENST00000553950 DAZ2Q13117 558 aaKnown RBP10.47□□□□□ -0.73
SHMT2-210ENST00000553950 SPANXN1Q5VSR9 72 aa10.47□□□□□ -0.73
SHMT2-210ENST00000553950 IL17DQ8TAD2 202 aa10.47□□□□□ -0.73
SHMT2-210ENST00000553950 SSBP4Q9BWG4 385 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-210ENST00000553950 SCRT2Q9NQ03 307 aa10.47□□□□□ -0.73
SHMT2-210ENST00000553950 A0A1B0GUT8 65 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 LYRM9A8MSI8 78 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 M0R2P5 195 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 GZMBP10144 247 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 RIGQ13278 110 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 Q8NAQ8 132 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 GTSF1Q8WW33 167 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 GSN-AS1Q9NRJ2 163 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 MDFICQ9P1T7 246 aa10.46□□□□□ -0.73
SHMT2-210ENST00000553950 IGHV4-28A0A0C4DH34 117 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 NXPH4O95158 308 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 TRGC1P0CF51 173 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 COX19Q49B96 90 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 RASL11AQ6T310 242 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 LYZL1Q6UWQ5 148 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 SMIM15Q7Z3B0 74 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 NUP35Q8NFH5 326 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 AP1S3Q96PC3 154 aa10.45□□□□□ -0.74
SHMT2-210ENST00000553950 IGHV4-4A0A075B6R2 117 aa10.44□□□□□ -0.74
SHMT2-210ENST00000553950 AZU1P20160 251 aa10.44□□□□□ -0.74
SHMT2-210ENST00000553950 ATRAIDQ6UW56 229 aa10.44□□□□□ -0.74
SHMT2-210ENST00000553950 M0R381 172 aa10.43□□□□□ -0.74
SHMT2-210ENST00000553950 HBBP68871 147 aa10.43□□□□□ -0.74
SHMT2-210ENST00000553950 OR10AG1Q8NH19 301 aa10.43□□□□□ -0.74
SHMT2-210ENST00000553950 RETNQ9HD89 108 aa10.43□□□□□ -0.74
SHMT2-210ENST00000553950 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
SHMT2-210ENST00000553950 MUC4Q99102 2169 aa10.43□□□□□ -0.74
SHMT2-210ENST00000553950 TRBV24-1A0A075B6N3 115 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 A8MWV9 139 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 CIDEAO60543 219 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 SPINK4O60575 86 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 TWIST1Q15672 202 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 ZNF575Q86XF7 245 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 CBLN2Q8IUK8 224 aa10.42□□□□□ -0.74
SHMT2-210ENST00000553950 NOP10Q9NPE3 64 aaKnown RBP10.42□□□□□ -0.74
SHMT2-210ENST00000553950 TRGV1A0A0A0MS02 117 aa10.41□□□□□ -0.74
SHMT2-210ENST00000553950 RHODO00212 210 aa10.41□□□□□ -0.74
SHMT2-210ENST00000553950 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
SHMT2-210ENST00000553950 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
SHMT2-210ENST00000553950 FAM3BP58499 235 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-210ENST00000553950 TMEM88Q6PEY1 159 aa10.41□□□□□ -0.74
SHMT2-210ENST00000553950 RASL10AQ92737 203 aa10.41□□□□□ -0.74
SHMT2-210ENST00000553950 MT-ND6P03923 174 aa10.4□□□□□ -0.74
SHMT2-210ENST00000553950 EMP1P54849 157 aa10.4□□□□□ -0.74
SHMT2-210ENST00000553950 ELOBQ15370 118 aa10.4□□□□□ -0.74
SHMT2-210ENST00000553950 MRPL54Q6P161 138 aaKnown RBP10.4□□□□□ -0.74
SHMT2-210ENST00000553950 C18orf15Q96N68 181 aa10.4□□□□□ -0.74
SHMT2-210ENST00000553950 A0A1B0GXF2 115 aa10.39□□□□□ -0.75
SHMT2-210ENST00000553950 PRM2P04554 102 aa10.39□□□□□ -0.75
SHMT2-210ENST00000553950 NTF3P20783 257 aa10.39□□□□□ -0.75
SHMT2-210ENST00000553950 FAM222AQ5U5X8 452 aa10.39□□□□□ -0.75
SHMT2-210ENST00000553950 LINC00612Q8N6U2 182 aa10.39□□□□□ -0.75
SHMT2-210ENST00000553950 MRPL16Q9NX20 251 aaKnown RBP10.39□□□□□ -0.75
SHMT2-210ENST00000553950 DKK2Q9UBU2 259 aa10.39□□□□□ -0.75
SHMT2-210ENST00000553950 TRGV2A0A075B6R0 118 aa10.38□□□□□ -0.75
SHMT2-210ENST00000553950 TRAV4A0A0B4J268 109 aa10.38□□□□□ -0.75
SHMT2-210ENST00000553950 DAD1P61803 113 aa10.38□□□□□ -0.75
SHMT2-210ENST00000553950 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
SHMT2-210ENST00000553950 GATD1Q8NB37 220 aa10.38□□□□□ -0.75
SHMT2-210ENST00000553950 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
SHMT2-210ENST00000553950 HLA-DQA1P01909 254 aa10.37□□□□□ -0.75
SHMT2-210ENST00000553950 Q6ZTI0 123 aa10.37□□□□□ -0.75
SHMT2-210ENST00000553950 FRZBQ92765 325 aa10.37□□□□□ -0.75
SHMT2-210ENST00000553950 FAM210BQ96KR6 192 aa10.37□□□□□ -0.75
SHMT2-210ENST00000553950 YPEL4Q96NS1 127 aa10.37□□□□□ -0.75
SHMT2-210ENST00000553950 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
SHMT2-210ENST00000553950 NACAE9PAV3 2078 aa10.37□□□□□ -0.75
SHMT2-210ENST00000553950 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 GAGE12BA1L429 117 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 GAGE7O76087 117 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 GAGE12FP0CL80 117 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 GAGE12GP0CL81 117 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 GAGE12IP0CL82 117 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 CAMPP49913 170 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 ZFP2Q6ZN57 461 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 GNB1LQ9BYB4 327 aa10.36□□□□□ -0.75
SHMT2-210ENST00000553950 TGIF2-C20orf24A0A0A6YYL0 155 aa10.35□□□□□ -0.75
SHMT2-210ENST00000553950 DEFB4AO15263 64 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms