RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 MT-ND4LP03901 98 aa0.27□□□□□ -2.37
LINC00648-201ENST00000553747 UNQ5815/PRO19632Q6UWF5 114 aa0.27□□□□□ -2.37
LINC00648-201ENST00000553747 TEX49A0A1B0GTD5 131 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 SMIM24O75264 130 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 RBP4P02753 201 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 CMPK1P30085 196 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 TMEM244Q5VVB8 128 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 SLC25A26Q70HW3 274 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 NDUFA11Q86Y39 141 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 ATP6V0E2Q8NHE4 81 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 VPS25Q9BRG1 176 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 TMEM14BQ9NUH8 114 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 ADGRB1O14514 1584 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 KDM6BO15054 1643 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 TRPM7Q96QT4 1865 aa0.26□□□□□ -2.37
LINC00648-201ENST00000553747 PRG4Q92954 1404 aaPredicted RBP0.25□□□□□ -2.37
LINC00648-201ENST00000553747 ARHGEF10O15013 1369 aa0.25□□□□□ -2.37
LINC00648-201ENST00000553747 MCRIP1C9JLW8 97 aa0.25□□□□□ -2.37
LINC00648-201ENST00000553747 M0R2P5 195 aa0.25□□□□□ -2.37
LINC00648-201ENST00000553747 CCKP06307 115 aa0.25□□□□□ -2.37
LINC00648-201ENST00000553747 IQCJQ1A5X6 159 aa0.25□□□□□ -2.37
LINC00648-201ENST00000553747 DYNLRB2Q8TF09 96 aa0.25□□□□□ -2.37
LINC00648-201ENST00000553747 RBBP6Q7Z6E9 1792 aaKnown RBP0.24□□□□□ -2.37
LINC00648-201ENST00000553747 TNS1Q9HBL0 1735 aaKnown RBP0.24□□□□□ -2.37
LINC00648-201ENST00000553747 LAMC3Q9Y6N6 1575 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 NAV2Q8IVL1 2488 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 TRAV12-2A0A075B6T6 113 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 APOC1P02654 83 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 PYYP10082 97 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 ATP11AUNQ6ZP68 121 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 SNX29P2Q8IUI4 249 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 DSCR8Q96T75 97 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 NOP16Q9Y3C1 178 aaKnown RBP0.24□□□□□ -2.37
LINC00648-201ENST00000553747 LAMB1P07942 1786 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 CASZ1Q86V15 1759 aa0.24□□□□□ -2.37
LINC00648-201ENST00000553747 SYNJ1O43426 1573 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 ERCC6Q03468 1493 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 DISP2A7MBM2 1401 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 MYOM3Q5VTT5 1437 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 TANC2Q9HCD6 1990 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 HELZP42694 1942 aaKnown RBP0.23□□□□□ -2.37
LINC00648-201ENST00000553747 KIF13AQ9H1H9 1805 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 TRAV17A0A0B4J275 112 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 CCDC179H3BU77 68 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 J3QLW9 94 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 NCR2O95944 276 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 CLLU1Q5K131 121 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 SPINK6Q6UWN8 80 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 PPP1R1CQ8WVI7 109 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 LSM2Q9Y333 95 aaKnown RBP0.23□□□□□ -2.37
LINC00648-201ENST00000553747 UNC13BO14795 1591 aa0.23□□□□□ -2.37
LINC00648-201ENST00000553747 CDK13Q14004 1512 aaKnown RBP0.23□□□□□ -2.37
LINC00648-201ENST00000553747 FHAD1B1AJZ9 1412 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 VIRMAQ69YN4 1812 aaKnown RBP0.22□□□□□ -2.37
LINC00648-201ENST00000553747 TRBV20-1A0A075B6N2 111 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 TSPAN19P0C672 248 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 MPC1LP0DKB6 136 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 ALX1Q15699 326 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 OR2T2Q6IF00 324 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 MMGT1Q8N4V1 131 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 COA4Q9NYJ1 87 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 ERG28Q9UKR5 140 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 BDP1A6H8Y1 2624 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 TANC1Q9C0D5 1861 aa0.22□□□□□ -2.37
LINC00648-201ENST00000553747 SYNE1Q8NF91 8797 aaKnown RBP0.21□□□□□ -2.38
LINC00648-201ENST00000553747 ARPC5O15511 151 aa0.21□□□□□ -2.38
LINC00648-201ENST00000553747 NCS1P62166 190 aa0.21□□□□□ -2.38
LINC00648-201ENST00000553747 EMX2Q04743 252 aa0.21□□□□□ -2.38
LINC00648-201ENST00000553747 TMEM141Q96I45 108 aa0.21□□□□□ -2.38
LINC00648-201ENST00000553747 BET1LQ9NYM9 111 aa0.21□□□□□ -2.38
LINC00648-201ENST00000553747 GSKIPQ9P0R6 139 aa0.21□□□□□ -2.38
LINC00648-201ENST00000553747 TNCP24821 2201 aa0.21□□□□□ -2.38
LINC00648-201ENST00000553747 SIPA1L3O60292 1781 aaPredicted RBP0.2□□□□□ -2.38
LINC00648-201ENST00000553747 TCRBV3S1A0A5B6 114 aa0.2□□□□□ -2.38
LINC00648-201ENST00000553747 ZNF670-ZNF695F2Z2N8 137 aa0.2□□□□□ -2.38
LINC00648-201ENST00000553747 SLC25A6P12236 298 aa0.2□□□□□ -2.38
LINC00648-201ENST00000553747 CYP2G1PQ6ZSU1 146 aa0.2□□□□□ -2.38
LINC00648-201ENST00000553747 VSTM2AQ8TAG5 236 aa0.2□□□□□ -2.38
LINC00648-201ENST00000553747 ANK2Q01484 3957 aa0.2□□□□□ -2.38
LINC00648-201ENST00000553747 PLXNA1Q9UIW2 1896 aa0.2□□□□□ -2.38
LINC00648-201ENST00000553747 TMEM2Q9UHN6 1383 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 NRXN2Q9P2S2 1712 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 IGLC6P0CF74 106 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 CCL3L1P16619 93 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 CKS1BP61024 79 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 HIST1H1AQ02539 215 aaPredicted RBP0.19□□□□□ -2.38
LINC00648-201ENST00000553747 PROK2Q9HC23 129 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 SAR1AQ9NR31 198 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 BATF3Q9NR55 127 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 FAT4Q6V0I7 4981 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 SOGA1O94964 1423 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 DAPK1P53355 1430 aa0.19□□□□□ -2.38
LINC00648-201ENST00000553747 MUC22E2RYF6 1773 aaPredicted RBP0.19□□□□□ -2.38
LINC00648-201ENST00000553747 A0A087WTM6 91 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 FAM236AA0A1B0GUQ0 79 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 FAM236BA0A1B0GV22 79 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 RBAKDNA6NC62 111 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 ELOF1P60002 83 aaKnown RBP0.18□□□□□ -2.38
LINC00648-201ENST00000553747 LINC01545Q5VT33 79 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 CTAGE3PQ8IX95 158 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms