RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 CCDC171Q6TFL3 1326 aa0.6□□□□□ -2.31
RPAP3-206ENST00000548296 ARHGEF10O15013 1369 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 OVOS2A0A0J9YW53 1432 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 OVOS2Q6IE36 1432 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 A0A096LNT2 108 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 TEX49A0A1B0GTD5 131 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 M0R2P5 195 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 FXYD1O00168 92 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 ARPC5O15511 151 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 DYNLRB2Q8TF09 96 aa0.59□□□□□ -2.31
RPAP3-206ENST00000548296 PRH1P02810 166 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 CKS1BP61024 79 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 CLLU1Q5K131 121 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 NDUFA11Q86Y39 141 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 SNX29P2Q8IUI4 249 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 MMGT1Q8N4V1 131 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 NOP16Q9Y3C1 178 aaKnown RBP0.58□□□□□ -2.32
RPAP3-206ENST00000548296 MAP2P11137 1827 aaKnown RBP0.58□□□□□ -2.32
RPAP3-206ENST00000548296 VIRMAQ69YN4 1812 aaKnown RBP0.58□□□□□ -2.32
RPAP3-206ENST00000548296 APCP25054 2843 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 MYH13Q9UKX3 1938 aa0.58□□□□□ -2.32
RPAP3-206ENST00000548296 TRAV17A0A0B4J275 112 aa0.57□□□□□ -2.32
RPAP3-206ENST00000548296 LOC105371267A0A1B0GV96 52 aa0.57□□□□□ -2.32
RPAP3-206ENST00000548296 APOC1P02654 83 aa0.57□□□□□ -2.32
RPAP3-206ENST00000548296 TMEM14BQ9NUH8 114 aa0.57□□□□□ -2.32
RPAP3-206ENST00000548296 LSM2Q9Y333 95 aaKnown RBP0.57□□□□□ -2.32
RPAP3-206ENST00000548296 CEP152O94986 1710 aa0.57□□□□□ -2.32
RPAP3-206ENST00000548296 TSPAN19P0C672 248 aa0.56□□□□□ -2.32
RPAP3-206ENST00000548296 NCS1P62166 190 aa0.56□□□□□ -2.32
RPAP3-206ENST00000548296 HIST1H1AQ02539 215 aaPredicted RBP0.56□□□□□ -2.32
RPAP3-206ENST00000548296 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
RPAP3-206ENST00000548296 GSKIPQ9P0R6 139 aa0.56□□□□□ -2.32
RPAP3-206ENST00000548296 ZNF142P52746 1687 aaPredicted RBP0.56□□□□□ -2.32
RPAP3-206ENST00000548296 ABCA4P78363 2273 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 DISP2A7MBM2 1401 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 SYNJ1O43426 1573 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 TRBV20-1A0A075B6N2 111 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 CCDC179H3BU77 68 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 J3QLW9 94 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 IGLC6P0CF74 106 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 SMR3AQ99954 134 aa0.55□□□□□ -2.32
RPAP3-206ENST00000548296 TANC1Q9C0D5 1861 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 TRAV12-2A0A075B6T6 113 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 PYYP10082 97 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 SLC25A6P12236 298 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 OR2T2Q6IF00 324 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 PPP1R1CQ8WVI7 109 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 SAR1AQ9NR31 198 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 RBBP6Q7Z6E9 1792 aaKnown RBP0.54□□□□□ -2.32
RPAP3-206ENST00000548296 KIF13AQ9H1H9 1805 aa0.54□□□□□ -2.32
RPAP3-206ENST00000548296 NCR2O95944 276 aa0.53□□□□□ -2.32
RPAP3-206ENST00000548296 MPC1LP0DKB6 136 aa0.53□□□□□ -2.32
RPAP3-206ENST00000548296 LZICQ8WZA0 190 aa0.53□□□□□ -2.32
RPAP3-206ENST00000548296 BET1LQ9NYM9 111 aa0.53□□□□□ -2.32
RPAP3-206ENST00000548296 ERG28Q9UKR5 140 aa0.53□□□□□ -2.32
RPAP3-206ENST00000548296 PTPRMP28827 1452 aa0.53□□□□□ -2.33
RPAP3-206ENST00000548296 MYH6P13533 1939 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 KMT2DO14686 5537 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 DSTQ03001 7570 aaKnown RBP0.52□□□□□ -2.33
RPAP3-206ENST00000548296 MCRIP1C9JLW8 97 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 KRTAP2-3P0C7H8 128 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 MAFIPQ8WZ33 124 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 TMEM141Q96I45 108 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 KRTAP2-4Q9BYR9 128 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 KRTAP2-1Q9BYU5 128 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 COA4Q9NYJ1 87 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 MEGF8Q7Z7M0 2845 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 PRG4Q92954 1404 aaPredicted RBP0.52□□□□□ -2.33
RPAP3-206ENST00000548296 ERCC6Q03468 1493 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 NAV3Q8IVL0 2385 aa0.52□□□□□ -2.33
RPAP3-206ENST00000548296 ABCA1O95477 2261 aa0.51□□□□□ -2.33
RPAP3-206ENST00000548296 LINC00694P0DN24 101 aa0.51□□□□□ -2.33
RPAP3-206ENST00000548296 DSCR8Q96T75 97 aa0.51□□□□□ -2.33
RPAP3-206ENST00000548296 PLXNA1Q9UIW2 1896 aa0.51□□□□□ -2.33
RPAP3-206ENST00000548296 FAM236AA0A1B0GUQ0 79 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 FAM236BA0A1B0GV22 79 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 J3QR89 54 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 TFF1P04155 84 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 EMX2Q04743 252 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 CTAGE3PQ8IX95 158 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 SMIM3Q9BZL3 60 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 TNCP24821 2201 aa0.5□□□□□ -2.33
RPAP3-206ENST00000548296 SYNE2Q8WXH0 6885 aaKnown RBP0.49□□□□□ -2.33
RPAP3-206ENST00000548296 FHAD1B1AJZ9 1412 aa0.49□□□□□ -2.33
RPAP3-206ENST00000548296 M0R2Z0 102 aa0.49□□□□□ -2.33
RPAP3-206ENST00000548296 ELOF1P60002 83 aaKnown RBP0.49□□□□□ -2.33
RPAP3-206ENST00000548296 IFI27L1Q96BM0 104 aa0.49□□□□□ -2.33
RPAP3-206ENST00000548296 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
RPAP3-206ENST00000548296 ADGRB1O14514 1584 aa0.49□□□□□ -2.33
RPAP3-206ENST00000548296 ZNF670-ZNF695F2Z2N8 137 aa0.48□□□□□ -2.33
RPAP3-206ENST00000548296 SMIM21Q3B7S5 101 aa0.48□□□□□ -2.33
RPAP3-206ENST00000548296 LINC01545Q5VT33 79 aa0.48□□□□□ -2.33
RPAP3-206ENST00000548296 VSTM2AQ8TAG5 236 aa0.48□□□□□ -2.33
RPAP3-206ENST00000548296 ANP32BQ92688 251 aaKnown RBP0.48□□□□□ -2.33
RPAP3-206ENST00000548296 COPZ2Q9P299 210 aa0.48□□□□□ -2.33
RPAP3-206ENST00000548296 AKAP11Q9UKA4 1901 aa0.47□□□□□ -2.33
RPAP3-206ENST00000548296 TCRBV3S1A0A5B6 114 aa0.47□□□□□ -2.33
RPAP3-206ENST00000548296 TSKUQ8WUA8 353 aa0.47□□□□□ -2.33
RPAP3-206ENST00000548296 KIAA0100Q14667 2235 aaKnown RBP0.47□□□□□ -2.33
RPAP3-206ENST00000548296 LAMB1P07942 1786 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms