RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 RNASE8Q8TDE3 154 aaKnown RBP9.01□□□□□ -0.97
LMO3-231ENST00000544754 TMEM263Q8WUH6 116 aaKnown RBP9.01□□□□□ -0.97
LMO3-231ENST00000544754 SCRT2Q9NQ03 307 aa9.01□□□□□ -0.97
LMO3-231ENST00000544754 GSN-AS1Q9NRJ2 163 aa9.01□□□□□ -0.97
LMO3-231ENST00000544754 TRAV9-1A0A075B6T8 112 aa9□□□□□ -0.97
LMO3-231ENST00000544754 SPINK4O60575 86 aa9□□□□□ -0.97
LMO3-231ENST00000544754 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
LMO3-231ENST00000544754 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
LMO3-231ENST00000544754 OR11H2Q8NH07 326 aa9□□□□□ -0.97
LMO3-231ENST00000544754 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
LMO3-231ENST00000544754 MRAPQ8TCY5 172 aa9□□□□□ -0.97
LMO3-231ENST00000544754 OVOL2Q9BRP0 275 aa9□□□□□ -0.97
LMO3-231ENST00000544754 RETNQ9HD89 108 aa9□□□□□ -0.97
LMO3-231ENST00000544754 TP53TG1Q9Y2A0 90 aa9□□□□□ -0.97
LMO3-231ENST00000544754 TGIF2-C20orf24A0A0A6YYL0 155 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 A0A1B0GUT8 65 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 PLAC8L1A1L4L8 177 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 SMIM9A6NGZ8 99 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 F2Z2F3 143 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 MRPL54Q6P161 138 aaKnown RBP8.99□□□□□ -0.97
LMO3-231ENST00000544754 ZNF493Q6ZR52 646 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 C16orf74Q96GX8 76 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 BTF3L4Q96K17 158 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
LMO3-231ENST00000544754 TRBV24-1A0A075B6N3 115 aa8.98□□□□□ -0.97
LMO3-231ENST00000544754 SSTP61278 116 aa8.98□□□□□ -0.97
LMO3-231ENST00000544754 BORCS7Q96B45 105 aa8.98□□□□□ -0.97
LMO3-231ENST00000544754 PHLDA3Q9Y5J5 127 aa8.98□□□□□ -0.97
LMO3-231ENST00000544754 DNHD1Q96M86 4753 aa8.98□□□□□ -0.97
LMO3-231ENST00000544754 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 A0A1B0GXF2 115 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 M0R381 172 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 NXPH4O95158 308 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
LMO3-231ENST00000544754 CACNG7P62955 275 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 RIGQ13278 110 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 SPANXN1Q5VSR9 72 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 WDR73Q6P4I2 378 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 Q8NAQ8 132 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 SPXQ9BT56 116 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 MSRB1Q9NZV6 116 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 NBEAL2Q6ZNJ1 2754 aa8.97□□□□□ -0.97
LMO3-231ENST00000544754 NACAE9PAV3 2078 aa8.96□□□□□ -0.97
LMO3-231ENST00000544754 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 COLCA2A8K830 154 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 MIFP14174 115 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 NTF3P20783 257 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 DEFA6Q01524 100 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 ATP5L2Q7Z4Y8 100 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 ZFP82Q8N141 532 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 TM2D3Q9BRN9 247 aa8.96□□□□□ -0.98
LMO3-231ENST00000544754 M0R2P5 195 aa8.95□□□□□ -0.98
LMO3-231ENST00000544754 HBBP68871 147 aa8.95□□□□□ -0.98
LMO3-231ENST00000544754 DAZ2Q13117 558 aaKnown RBP8.95□□□□□ -0.98
LMO3-231ENST00000544754 TWIST1Q15672 202 aa8.95□□□□□ -0.98
LMO3-231ENST00000544754 SYT8Q8NBV8 401 aa8.95□□□□□ -0.98
LMO3-231ENST00000544754 PTH2Q96A98 100 aa8.95□□□□□ -0.98
LMO3-231ENST00000544754 FAM210BQ96KR6 192 aa8.95□□□□□ -0.98
LMO3-231ENST00000544754 SPATA25Q9BR10 227 aa8.95□□□□□ -0.98
LMO3-231ENST00000544754 NOP10Q9NPE3 64 aaKnown RBP8.95□□□□□ -0.98
LMO3-231ENST00000544754 MRPL16Q9NX20 251 aaKnown RBP8.95□□□□□ -0.98
LMO3-231ENST00000544754 A0A1B0GW15 77 aa8.94□□□□□ -0.98
LMO3-231ENST00000544754 DEFB4AO15263 64 aa8.94□□□□□ -0.98
LMO3-231ENST00000544754 CAMPP49913 170 aa8.94□□□□□ -0.98
LMO3-231ENST00000544754 EMP1P54849 157 aa8.94□□□□□ -0.98
LMO3-231ENST00000544754 ZNF876PQ49A33 203 aa8.94□□□□□ -0.98
LMO3-231ENST00000544754 RASL11AQ6T310 242 aa8.94□□□□□ -0.98
LMO3-231ENST00000544754 B9D2Q9BPU9 175 aa8.94□□□□□ -0.98
LMO3-231ENST00000544754 TENM3Q9P273 2699 aa8.93□□□□□ -0.98
LMO3-231ENST00000544754 TRGV1A0A0A0MS02 117 aa8.93□□□□□ -0.98
LMO3-231ENST00000544754 A6NJY4 79 aa8.93□□□□□ -0.98
LMO3-231ENST00000544754 TMEM136Q6ZRR5 245 aa8.93□□□□□ -0.98
LMO3-231ENST00000544754 Q6ZTI0 123 aa8.93□□□□□ -0.98
LMO3-231ENST00000544754 GATD1Q8NB37 220 aa8.93□□□□□ -0.98
LMO3-231ENST00000544754 JPT2Q9H910 190 aa8.93□□□□□ -0.98
LMO3-231ENST00000544754 S100A8P05109 93 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 TRGC1P0CF51 173 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 RAB5AP20339 215 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 RAB4BP61018 213 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 LGALS9BQ3B8N2 356 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 COX19Q49B96 90 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 PIK3CD-AS1Q5SR53 167 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.92□□□□□ -0.98
LMO3-231ENST00000544754 RASL10AQ92737 203 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 AP1S3Q96PC3 154 aa8.92□□□□□ -0.98
LMO3-231ENST00000544754 GAGE12BA1L429 117 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 GAGE7O76087 117 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 EVI2AP22794 236 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 GNB1LQ9BYB4 327 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 TMEM191AQ9H0A3 160 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 ZMAT4Q9H898 229 aa8.91□□□□□ -0.98
LMO3-231ENST00000544754 LYRM9A8MSI8 78 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 RS1O15537 224 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 HLA-DQA1P01909 254 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms