RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CTRLP40313 264 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 CACNG7P62955 275 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 RIGQ13278 110 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 RASL11AQ6T310 242 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 C1orf158Q8N1D5 194 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 C16orf74Q96GX8 76 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 RCHY1Q96PM5 261 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 SPXQ9BT56 116 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 TP53TG3Q9ULZ0 132 aa6.91□□□□□ -1.3
YBX3-215ENST00000544504 IGHV3OR16-12A0A075B7B8 117 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 GRIFINA4D1Z8 144 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 SNURFLB1AK76 121 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 SNAI2O43623 268 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 ARMS2P0C7Q2 107 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 FRMD6-AS1P0C7T7 363 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 RBMY1A1P0DJD3 496 aaKnown RBP6.9□□□□□ -1.3
YBX3-215ENST00000544504 RBMY1CP0DJD4 496 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 TCL1AP56279 114 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 RBMY1FQ15415 496 aaKnown RBP6.9□□□□□ -1.3
YBX3-215ENST00000544504 TMEM88Q6PEY1 159 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 CBLN2Q8IUK8 224 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 ZFP82Q8N141 532 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 NUP35Q8NFH5 326 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
YBX3-215ENST00000544504 GTSF1Q8WW33 167 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 PTH2Q96A98 100 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 NDUFAF3Q9BU61 184 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 TPPP3Q9BW30 176 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
YBX3-215ENST00000544504 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 URGCP-MRPS24S4R325 110 aa6.9□□□□□ -1.3
YBX3-215ENST00000544504 H3BVH4 76 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 GNRH2O43555 120 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 SPRY2O43597 315 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 GZMBP10144 247 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 HTN1P15515 57 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 FAM3BP58499 235 aaPredicted RBP6.89□□□□□ -1.31
YBX3-215ENST00000544504 ELOBQ15370 118 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 PIK3CD-AS1Q5SR53 167 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 SPANXN1Q5VSR9 72 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 LYZL1Q6UWQ5 148 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 Q6ZQT7 251 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 RNF183Q96D59 192 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 CNFNQ9BYD5 112 aa6.89□□□□□ -1.31
YBX3-215ENST00000544504 IGHV4-4A0A075B6R2 117 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
YBX3-215ENST00000544504 MIFP14174 115 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 HBBP68871 147 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 DEFB135Q30KP9 77 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 ZFAND6Q6FIF0 208 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 C9orf85Q96MD7 179 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 SCRT2Q9NQ03 307 aa6.88□□□□□ -1.31
YBX3-215ENST00000544504 M0R2P5 195 aa6.87□□□□□ -1.31
YBX3-215ENST00000544504 SCO1O75880 301 aa6.87□□□□□ -1.31
YBX3-215ENST00000544504 MT-ND6P03923 174 aa6.87□□□□□ -1.31
YBX3-215ENST00000544504 LGALS9BQ3B8N2 356 aa6.87□□□□□ -1.31
YBX3-215ENST00000544504 OR11H2Q8NH07 326 aa6.87□□□□□ -1.31
YBX3-215ENST00000544504 RNASE8Q8TDE3 154 aaKnown RBP6.87□□□□□ -1.31
YBX3-215ENST00000544504 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
YBX3-215ENST00000544504 TIMM8BQ9Y5J9 83 aaPredicted RBP6.87□□□□□ -1.31
YBX3-215ENST00000544504 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
YBX3-215ENST00000544504 TEX48A0A1B0GUV7 120 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 NXPH4O95158 308 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 HLA-DQA1P01909 254 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 NTF3P20783 257 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 DAZ2Q13117 558 aaKnown RBP6.86□□□□□ -1.31
YBX3-215ENST00000544504 TWIST1Q15672 202 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 MRPL54Q6P161 138 aaKnown RBP6.86□□□□□ -1.31
YBX3-215ENST00000544504 ZNF575Q86XF7 245 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 C11orf72Q8NBR9 251 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 OR10AG1Q8NH19 301 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 AP1S3Q96PC3 154 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 GNB1LQ9BYB4 327 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 GSN-AS1Q9NRJ2 163 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 MDFICQ9P1T7 246 aa6.86□□□□□ -1.31
YBX3-215ENST00000544504 TGIF2-C20orf24A0A0A6YYL0 155 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 A0A1B0GXF2 115 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 A8MWV9 139 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 M0R381 172 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 CIDEAO60543 219 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 SPINK4O60575 86 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 SMIM17P0DL12 118 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 AZU1P20160 251 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 ZNF876PQ49A33 203 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 OVOL2Q9BRP0 275 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 ZMAT4Q9H898 229 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 X6R8D5 127 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 ALMS1Q8TCU4 4167 aa6.85□□□□□ -1.31
YBX3-215ENST00000544504 COLCA2A8K830 154 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 LYRM9A8MSI8 78 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 RAB5AP20339 215 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 CAMPP49913 170 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms