RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ZNF415Q09FC8 603 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 SPANXN1Q5VSR9 72 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 RASL11AQ6T310 242 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 C9orf85Q96MD7 179 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 SCRT2Q9NQ03 307 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 A0A1B0GW15 77 aa11.71□□□□□ -0.54
TRAF3-204ENST00000539721 AZU1P20160 251 aa11.71□□□□□ -0.54
TRAF3-204ENST00000539721 NTF3P20783 257 aa11.71□□□□□ -0.54
TRAF3-204ENST00000539721 TWIST1Q15672 202 aa11.71□□□□□ -0.54
TRAF3-204ENST00000539721 DEFB135Q30KP9 77 aa11.71□□□□□ -0.54
TRAF3-204ENST00000539721 COX19Q49B96 90 aa11.71□□□□□ -0.54
TRAF3-204ENST00000539721 WDR73Q6P4I2 378 aa11.71□□□□□ -0.54
TRAF3-204ENST00000539721 SNURFLB1AK76 121 aa11.7□□□□□ -0.54
TRAF3-204ENST00000539721 M0R381 172 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 S100A8P05109 93 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 TMEM136Q6ZRR5 245 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 GNB1LQ9BYB4 327 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 GSN-AS1Q9NRJ2 163 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 RRN3P1Q2M238 152 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 ZFP82Q8N141 532 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 C11orf72Q8NBR9 251 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
TRAF3-204ENST00000539721 TRAPPC1Q9Y5R8 145 aa11.69□□□□□ -0.54
TRAF3-204ENST00000539721 MUC4Q99102 2169 aa11.68□□□□□ -0.54
TRAF3-204ENST00000539721 IGHV4-4A0A075B6R2 117 aa11.68□□□□□ -0.54
TRAF3-204ENST00000539721 RNASE8Q8TDE3 154 aaKnown RBP11.68□□□□□ -0.54
TRAF3-204ENST00000539721 FRZBQ92765 325 aa11.68□□□□□ -0.54
TRAF3-204ENST00000539721 C16orf74Q96GX8 76 aa11.68□□□□□ -0.54
TRAF3-204ENST00000539721 RCHY1Q96PM5 261 aa11.68□□□□□ -0.54
TRAF3-204ENST00000539721 K7EIL1 84 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 MT-ND6P03923 174 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 Q6ZWC4 215 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 SYT8Q8NBV8 401 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 MGAM2Q2M2H8 2515 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 NOTCH1P46531 2555 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 TRGC2P03986 189 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 SPXQ9BT56 116 aa11.67□□□□□ -0.54
TRAF3-204ENST00000539721 MRPL18Q9H0U6 180 aaKnown RBP11.67□□□□□ -0.54
TRAF3-204ENST00000539721 NXPH4O95158 308 aa11.66□□□□□ -0.54
TRAF3-204ENST00000539721 FABP9Q0Z7S8 132 aa11.66□□□□□ -0.54
TRAF3-204ENST00000539721 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
TRAF3-204ENST00000539721 RNF183Q96D59 192 aa11.66□□□□□ -0.54
TRAF3-204ENST00000539721 X6R8D5 127 aa11.66□□□□□ -0.54
TRAF3-204ENST00000539721 SMIM9A6NGZ8 99 aa11.65□□□□□ -0.54
TRAF3-204ENST00000539721 M0R2P5 195 aa11.65□□□□□ -0.54
TRAF3-204ENST00000539721 TRGC1P0CF51 173 aa11.65□□□□□ -0.54
TRAF3-204ENST00000539721 ZNF876PQ49A33 203 aa11.65□□□□□ -0.54
TRAF3-204ENST00000539721 SMIM15Q7Z3B0 74 aa11.65□□□□□ -0.54
TRAF3-204ENST00000539721 OR11H2Q8NH07 326 aa11.65□□□□□ -0.54
TRAF3-204ENST00000539721 DEFB121Q5J5C9 76 aa11.64□□□□□ -0.55
TRAF3-204ENST00000539721 IL17DQ8TAD2 202 aa11.64□□□□□ -0.55
TRAF3-204ENST00000539721 TMEM191AQ9H0A3 160 aa11.64□□□□□ -0.55
TRAF3-204ENST00000539721 APCSP02743 223 aa11.64□□□□□ -0.55
TRAF3-204ENST00000539721 AP1S3Q96PC3 154 aa11.64□□□□□ -0.55
TRAF3-204ENST00000539721 NBEAL1Q6ZS30 2694 aa11.63□□□□□ -0.55
TRAF3-204ENST00000539721 C1orf196B1AJZ1 125 aa11.63□□□□□ -0.55
TRAF3-204ENST00000539721 EVI2AP22794 236 aa11.63□□□□□ -0.55
TRAF3-204ENST00000539721 SLAQ13239 276 aa11.63□□□□□ -0.55
TRAF3-204ENST00000539721 MRPL16Q9NX20 251 aaKnown RBP11.63□□□□□ -0.55
TRAF3-204ENST00000539721 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
TRAF3-204ENST00000539721 AMN1Q8IY45 258 aa11.62□□□□□ -0.55
TRAF3-204ENST00000539721 PTH2Q96A98 100 aa11.62□□□□□ -0.55
TRAF3-204ENST00000539721 FAM104BQ5XKR9 115 aa11.62□□□□□ -0.55
TRAF3-204ENST00000539721 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-204ENST00000539721 JPT2Q9H910 190 aa11.62□□□□□ -0.55
TRAF3-204ENST00000539721 NOP10Q9NPE3 64 aaKnown RBP11.62□□□□□ -0.55
TRAF3-204ENST00000539721 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 SMIM17P0DL12 118 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 EMP1P54849 157 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
TRAF3-204ENST00000539721 KIAA1644Q3SXP7 199 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 RETNQ9HD89 108 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 TP53TG1Q9Y2A0 90 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 DNHD1Q96M86 4753 aa11.61□□□□□ -0.55
TRAF3-204ENST00000539721 PHOX2AO14813 284 aa11.6□□□□□ -0.55
TRAF3-204ENST00000539721 MIFP14174 115 aa11.6□□□□□ -0.55
TRAF3-204ENST00000539721 PIK3CD-AS1Q5SR53 167 aa11.6□□□□□ -0.55
TRAF3-204ENST00000539721 OVOL2Q9BRP0 275 aa11.6□□□□□ -0.55
TRAF3-204ENST00000539721 TMA7Q9Y2S6 64 aaKnown RBP11.6□□□□□ -0.55
TRAF3-204ENST00000539721 RAB5BP61020 215 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 RASL10AQ92737 203 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 A0A087WWL8 130 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 IGHV4-28A0A0C4DH34 117 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 MGPP08493 103 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 RAB4AP20338 218 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 LGALS9BQ3B8N2 356 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 MRPL51Q4U2R6 128 aaKnown RBP11.59□□□□□ -0.55
TRAF3-204ENST00000539721 Q6ZTI0 123 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 SBSPONQ8IVN8 264 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
TRAF3-204ENST00000539721 A8MWV9 139 aa11.58□□□□□ -0.56
TRAF3-204ENST00000539721 FAM74A4Q5TZK3 123 aa11.58□□□□□ -0.56
TRAF3-204ENST00000539721 Q8NAQ8 132 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms