RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TRANK1O15050 2925 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 CHD9Q3L8U1 2897 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 PDE4DIPQ5VU43 2346 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 C5orf58C9J3I9 102 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 PPYP01298 95 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 SDC2P34741 201 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 NDUFA6P56556 154 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 SMIM15Q7Z3B0 74 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.43□□□□□ -2.18
PRKDC-208ENST00000536710 OR4B1Q8NGF8 309 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 MCEEQ96PE7 176 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 SCN3AQ9NY46 2000 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 MED23Q9ULK4 1368 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 CHD7Q9P2D1 2997 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 MYH10P35580 1976 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 A0A0G2JMZ2 1700 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 ZNF236Q9UL36 1845 aa1.43□□□□□ -2.18
PRKDC-208ENST00000536710 H7BYZ3 331 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 MRPS36P82909 103 aaKnown RBP1.42□□□□□ -2.18
PRKDC-208ENST00000536710 OR5H6Q8NGV6 325 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 RMND5BQ96G75 393 aaPredicted RBP1.42□□□□□ -2.18
PRKDC-208ENST00000536710 OR4C12Q96R67 309 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 EFCAB11Q9BUY7 163 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 SMPXQ9UHP9 88 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 RFX7Q2KHR2 1363 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 MYH7P12883 1935 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 MYH8P13535 1937 aa1.42□□□□□ -2.18
PRKDC-208ENST00000536710 MYH1P12882 1939 aa1.41□□□□□ -2.18
PRKDC-208ENST00000536710 TRAV23DV6A0A075B6W5 121 aa1.41□□□□□ -2.18
PRKDC-208ENST00000536710 FABP4P15090 132 aa1.41□□□□□ -2.18
PRKDC-208ENST00000536710 TFAMQ00059 246 aaKnown RBP1.41□□□□□ -2.18
PRKDC-208ENST00000536710 DIAPH2-AS1Q14236 149 aa1.41□□□□□ -2.18
PRKDC-208ENST00000536710 PSMF1Q92530 271 aa1.41□□□□□ -2.18
PRKDC-208ENST00000536710 PLXNA1Q9UIW2 1896 aa1.41□□□□□ -2.18
PRKDC-208ENST00000536710 LRRC37A2A6NM11 1700 aa1.4□□□□□ -2.18
PRKDC-208ENST00000536710 WDFY4Q6ZS81 3184 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 JMJD7-PLA2G4BH0Y9G9 81 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 FAM107AO95990 144 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 MIR22HGQ0VDD5 57 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 HRCT1Q6UXD1 115 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 KRTAP4-1Q9BYQ7 146 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 CST11Q9H112 138 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 PRO3102Q9H379 93 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 TAF9BQ9HBM6 251 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 TRIOO75962 3097 aa1.4□□□□□ -2.19
PRKDC-208ENST00000536710 C5orf42Q9H799 3197 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 KIAA0100Q14667 2235 aaKnown RBP1.39□□□□□ -2.19
PRKDC-208ENST00000536710 ATG2AQ2TAZ0 1938 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 MYH4Q9Y623 1939 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 S100GP29377 79 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 EFNA4P52798 201 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 SAMD13Q5VXD3 122 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 FOXI2Q6ZQN5 318 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 LINC00305Q7Z4B0 112 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 THEM6Q8WUY1 208 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 PRELID3AQ96N28 172 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 CEP290O15078 2479 aa1.39□□□□□ -2.19
PRKDC-208ENST00000536710 LAMA4Q16363 1823 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 USP34Q70CQ2 3546 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 TANC1Q9C0D5 1861 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 TEX29Q8N6K0 151 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 DIRC1Q969H9 104 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 TRAPPC2LQ9UL33 140 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 MED31Q9Y3C7 131 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 NCOA6Q14686 2063 aaPredicted RBP1.38□□□□□ -2.19
PRKDC-208ENST00000536710 MCM3APO60318 1980 aa1.38□□□□□ -2.19
PRKDC-208ENST00000536710 NUP210LQ5VU65 1888 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 MYO15AQ9UKN7 3530 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 SPATA45Q537H7 98 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 TMEM128Q5BJH2 165 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 OR5AK2Q8NH90 309 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 LXNQ9BS40 222 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 NIT2Q9NQR4 276 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 FRYLO94915 3013 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 VPS13AQ96RL7 3174 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 SIP14410 1827 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 DMDP11532 3685 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 DCHS1Q96JQ0 3298 aa1.37□□□□□ -2.19
PRKDC-208ENST00000536710 COL4A6Q14031 1691 aa1.36□□□□□ -2.19
PRKDC-208ENST00000536710 H0YJX3 145 aa1.36□□□□□ -2.19
PRKDC-208ENST00000536710 TPT1P13693 172 aaKnown RBP1.36□□□□□ -2.19
PRKDC-208ENST00000536710 MRPL40Q9NQ50 206 aaKnown RBP1.36□□□□□ -2.19
PRKDC-208ENST00000536710 HSPB8Q9UJY1 196 aa1.36□□□□□ -2.19
PRKDC-208ENST00000536710 MYH6P13533 1939 aa1.36□□□□□ -2.19
PRKDC-208ENST00000536710 BDP1A6H8Y1 2624 aa1.36□□□□□ -2.19
PRKDC-208ENST00000536710 DMXL1Q9Y485 3027 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 CFAP54Q96N23 3096 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 TRAV13-1A0A0B4J241 112 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 TRACP01848 142 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 POLR2HP52434 150 aaKnown RBP1.35□□□□□ -2.19
PRKDC-208ENST00000536710 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
PRKDC-208ENST00000536710 Q8N6K4 173 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 DDA1Q9BW61 102 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 WDFY3Q8IZQ1 3526 aa1.35□□□□□ -2.19
PRKDC-208ENST00000536710 KIAA1549Q9HCM3 1950 aa1.34□□□□□ -2.19
PRKDC-208ENST00000536710 C3orf85A0A1B0GTC6 90 aa1.34□□□□□ -2.19
PRKDC-208ENST00000536710 RPL7P18124 248 aaKnown RBP1.34□□□□□ -2.19
PRKDC-208ENST00000536710 MAXP61244 160 aa1.34□□□□□ -2.19
PRKDC-208ENST00000536710 TOMM20LQ6UXN7 152 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms