RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 LINC00205P59089 165 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
CSRP1-218ENST00000533402 ZCCHC24Q8N2G6 241 aaKnown RBP6.24□□□□□ -1.41
CSRP1-218ENST00000533402 PIP4P2Q8N4L2 257 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 TECTAO75443 2155 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 PLA2G5P39877 138 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 ZNF672Q499Z4 452 aaPredicted RBP6.24□□□□□ -1.41
CSRP1-218ENST00000533402 C15orf32Q32M92 178 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 CFHR4Q92496 578 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 DKK4Q9UBT3 224 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 E9PLD3 99 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 CRYGCP07315 174 aa6.24□□□□□ -1.41
CSRP1-218ENST00000533402 H3BUX3 64 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 VSIG2Q96IQ7 327 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 RNF223E7ERA6 249 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 TRBV12-3P01733 135 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 IGFL3Q6UXB1 125 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 C9orf66Q5T8R8 295 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 FAM110DQ8TAY7 271 aaPredicted RBP6.23□□□□□ -1.41
CSRP1-218ENST00000533402 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 LINC01619G3V211 115 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 TGFBR3LH3BV60 316 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 PRR30Q53SZ7 412 aaPredicted RBP6.23□□□□□ -1.41
CSRP1-218ENST00000533402 C9orf106Q8NAJ2 232 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 PLA2G2EQ9NZK7 142 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 VMO1Q7Z5L0 202 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 PRR25Q96S07 402 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 GPR179Q6PRD1 2367 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 H0YGX0 51 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 C11orf44Q8N8P7 122 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 TIMM17BO60830 172 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 TMEM14BQ9NUH8 114 aa6.23□□□□□ -1.41
CSRP1-218ENST00000533402 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 SHISA2Q6UWI4 295 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 NDUFA11Q86Y39 141 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 LYPD6Q86Y78 171 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 PLA2G2CQ5R387 149 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 IGHV1-2P23083 117 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
CSRP1-218ENST00000533402 CSDC2Q9Y534 153 aaKnown RBP6.22□□□□□ -1.41
CSRP1-218ENST00000533402 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 TM2D2Q9BX73 214 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 RPL35AP18077 110 aaKnown RBP6.22□□□□□ -1.41
CSRP1-218ENST00000533402 SPG11Q96JI7 2443 aa6.22□□□□□ -1.41
CSRP1-218ENST00000533402 IGKV1-6A0A0C4DH72 117 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 C2orf70A6NJV1 201 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.41
CSRP1-218ENST00000533402 FXYD5Q96DB9 178 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 C14orf132Q9NPU4 83 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 DAZ1Q9NQZ3 744 aaKnown RBP6.21□□□□□ -1.41
CSRP1-218ENST00000533402 NXPH4O95158 308 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 RFPL3SP0C7P2 107 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 SEC61GP60059 68 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 Q6ZS92 163 aa6.21□□□□□ -1.41
CSRP1-218ENST00000533402 ETV2O00321 342 aaPredicted RBP6.21□□□□□ -1.42
CSRP1-218ENST00000533402 FAM19A5Q7Z5A7 132 aaPredicted RBP6.21□□□□□ -1.42
CSRP1-218ENST00000533402 UPK3BQ9BT76 320 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 ELANEP08246 267 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 XGP55808 180 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 LOXL1Q08397 574 aaPredicted RBP6.21□□□□□ -1.42
CSRP1-218ENST00000533402 C5orf63A6NC05 138 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 Q6P435 159 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 Q9H8V8 135 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 C5orf42Q9H799 3197 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 JMJD7-PLA2G4BH0Y9G9 81 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 CCL18P55774 89 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 IMUPQ9GZP8 106 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 ANKHD1Q8IWZ3 2542 aaKnown RBP6.21□□□□□ -1.42
CSRP1-218ENST00000533402 DYNAPQ8N1N2 210 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 SERP2Q8N6R1 65 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 PIFOQ8TCI5 191 aa6.21□□□□□ -1.42
CSRP1-218ENST00000533402 COL5A1P20908 1838 aaPredicted RBP6.2□□□□□ -1.42
CSRP1-218ENST00000533402 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 FANCD2OSQ96PS1 177 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 COX7CP15954 63 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 RHOHQ15669 191 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 IGKV1-16P04430 117 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 CTRLP40313 264 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 EFNA2O43921 213 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 DKK1O94907 266 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 TMEM14CQ9P0S9 112 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 ACACBO00763 2458 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 IGKV1-39P01597 117 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 IGKV1D-39P04432 117 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 VPREB3Q9UKI3 123 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 OTOGLQ3ZCN5 2332 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV3-53P01767 116 aa6.2□□□□□ -1.42
CSRP1-218ENST00000533402 ODF1Q14990 250 aa6.19□□□□□ -1.42
CSRP1-218ENST00000533402 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
CSRP1-218ENST00000533402 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
CSRP1-218ENST00000533402 RBAKDNA6NC62 111 aa6.19□□□□□ -1.42
CSRP1-218ENST00000533402 MBD3L4A6NDZ8 208 aaPredicted RBP6.19□□□□□ -1.42
CSRP1-218ENST00000533402 MBD3L3A6NE82 208 aaPredicted RBP6.19□□□□□ -1.42
CSRP1-218ENST00000533402 MBD3L5A6NJ08 208 aaPredicted RBP6.19□□□□□ -1.42
CSRP1-218ENST00000533402 NDUFS5O43920 106 aa6.19□□□□□ -1.42
CSRP1-218ENST00000533402 NREPQ16612 68 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms