RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 TRBV7-6A0A0J9YX20 115 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 A0A0J9YY99 117 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 TRBV27A0A0K0K1C4 114 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 A0A1B0GW64 132 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 J3KT08 172 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 TRACP01848 142 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 PAEPP09466 180 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 CMPK1P30085 196 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 ETV6P41212 452 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 RPS25P62851 125 aaKnown RBP1.03□□□□□ -2.24
CPNE3-207ENST00000523588 RPS28P62857 69 aaKnown RBP1.03□□□□□ -2.24
CPNE3-207ENST00000523588 DCDP81605 110 aaKnown RBP1.03□□□□□ -2.24
CPNE3-207ENST00000523588 MORN2Q502X0 79 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 C6orf52Q5T4I8 152 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 HRCT1Q6UXD1 115 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 CASC2Q6XLA1 102 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 LINC00305Q7Z4B0 112 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 TCTE3Q8IZS6 198 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 TCTEX1D1Q8N7M0 179 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 OR4S1Q8NGB4 309 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 LCN9Q8WX39 176 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 S100ZQ8WXG8 99 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 PSMG3Q9BT73 122 aaPredicted RBP1.03□□□□□ -2.24
CPNE3-207ENST00000523588 Q9H521 79 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 SAR1AQ9NR31 198 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 CBLN4Q9NTU7 201 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 TRAPPC2LQ9UL33 140 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 BOKQ9UMX3 212 aaPredicted RBP1.03□□□□□ -2.24
CPNE3-207ENST00000523588 V9GYS6 101 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 TROQ12816 1431 aaPredicted RBP1.03□□□□□ -2.24
CPNE3-207ENST00000523588 NAIPQ13075 1403 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 CCDC88BA6NC98 1476 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 ADGRL2O95490 1459 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 FANCD2Q9BXW9 1451 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 MLH3Q9UHC1 1453 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 ZFYVE16Q7Z3T8 1539 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 INO80Q9ULG1 1556 aaPredicted RBP1.03□□□□□ -2.24
CPNE3-207ENST00000523588 LRRIQ1Q96JM4 1722 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 ANKRD26Q9UPS8 1709 aa1.03□□□□□ -2.24
CPNE3-207ENST00000523588 KIF20BQ96Q89 1820 aa1.03□□□□□ -2.25
CPNE3-207ENST00000523588 CDK5RAP2Q96SN8 1893 aa1.03□□□□□ -2.25
CPNE3-207ENST00000523588 MYH1P12882 1939 aa1.03□□□□□ -2.25
CPNE3-207ENST00000523588 OVOS2A0A0G2JMS6 1433 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 LOC107984640A0A0U1RRK4 108 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 IFITM5A6NNB3 132 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 C9JAW5 83 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 M0R2Z0 102 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 CACNA1AO00555 2505 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 EDF1O60869 148 aaKnown RBP1.02□□□□□ -2.25
CPNE3-207ENST00000523588 OR2H2O95918 312 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 DBIP07108 87 aaKnown RBP1.02□□□□□ -2.25
CPNE3-207ENST00000523588 CD14P08571 375 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 SAA1P0DJI8 122 aaPredicted RBP1.02□□□□□ -2.25
CPNE3-207ENST00000523588 LINC00694P0DN24 101 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 TPT1P13693 172 aaKnown RBP1.02□□□□□ -2.25
CPNE3-207ENST00000523588 EVI2AP22794 236 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 GNG4P50150 75 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 S100A10P60903 97 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 NCS1P62166 190 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 HSD52Q0P140 79 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 Q5XG85 94 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 IZUMO2Q6UXV1 221 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 ZNF720Q7Z2F6 126 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 BCL9LQ86UU0 1499 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 C5orf17Q8NAS9 161 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 TMEM229BQ8NBD8 167 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 OR5A2Q8NGI9 324 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 CLEC2BQ92478 149 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 PRXQ9BXM0 1461 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 SPANXCQ9NY87 97 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 COMMD3Q9UBI1 195 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 HIGD1AQ9Y241 93 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 COL6A3P12111 3177 aa1.02□□□□□ -2.25
CPNE3-207ENST00000523588 MYH6P13533 1939 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 ZC3H13Q5T200 1668 aaKnown RBP1.01□□□□□ -2.25
CPNE3-207ENST00000523588 CTTNBP2Q8WZ74 1663 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 MAGI3Q5TCQ9 1506 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 PZPP20742 1482 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 DISP2A7MBM2 1401 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 TRAV13-1A0A0B4J241 112 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 A0A0G2JMM0 328 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 PNMA8CA0A1B0GUJ8 204 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 A0A1W2PPB8 328 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 KIR3DP1A8MWS1 328 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 CCDC179H3BU77 68 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 PDCD5O14737 125 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 SNAPC5O75971 98 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 APOC3P02656 99 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 DEFA5Q01523 94 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 PEA15Q15121 130 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 ALKAL2Q6UX46 152 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 SVBPQ8N300 66 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.01□□□□□ -2.25
CPNE3-207ENST00000523588 OR51A4Q8NGJ6 313 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 PP6455Q8WZ26 134 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 AP4S1Q9Y587 144 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 FANCMQ8IYD8 2048 aa1.01□□□□□ -2.25
CPNE3-207ENST00000523588 MAP2P11137 1827 aaKnown RBP1.01□□□□□ -2.25
CPNE3-207ENST00000523588 USP54Q70EL1 1684 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 HFM1A2PYH4 1435 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms