RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CYSLTR1Q9Y271 337 aa11.29□□□□□ -0.6
SNF8-203ENST00000504000 POLR2KP53803 58 aaKnown RBP11.28□□□□□ -0.6
SNF8-203ENST00000504000 CD300EQ496F6 205 aaPredicted RBP11.28□□□□□ -0.6
SNF8-203ENST00000504000 GAGE13Q4V321 117 aa11.28□□□□□ -0.6
SNF8-203ENST00000504000 PRO0461Q9UI25 63 aa11.28□□□□□ -0.6
SNF8-203ENST00000504000 H3BMG7 143 aa11.27□□□□□ -0.6
SNF8-203ENST00000504000 TRBV12-3P01733 135 aa11.27□□□□□ -0.6
SNF8-203ENST00000504000 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.6
SNF8-203ENST00000504000 WFDC2Q14508 124 aa11.27□□□□□ -0.6
SNF8-203ENST00000504000 TMEM141Q96I45 108 aa11.27□□□□□ -0.6
SNF8-203ENST00000504000 KLK15Q9H2R5 256 aa11.27□□□□□ -0.6
SNF8-203ENST00000504000 CSMD1Q96PZ7 3565 aa11.27□□□□□ -0.6
SNF8-203ENST00000504000 IGIPA6NJ69 53 aa11.27□□□□□ -0.61
SNF8-203ENST00000504000 K7EMT4 169 aa11.27□□□□□ -0.61
SNF8-203ENST00000504000 CRYGDP07320 174 aa11.27□□□□□ -0.61
SNF8-203ENST00000504000 UBE2D1P51668 147 aa11.27□□□□□ -0.61
SNF8-203ENST00000504000 MORN3Q6PF18 240 aaPredicted RBP11.27□□□□□ -0.61
SNF8-203ENST00000504000 VCYO14598 125 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 GNRH2O43555 120 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 MGPP08493 103 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 SIGMAR1Q99720 223 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 SPATA25Q9BR10 227 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
SNF8-203ENST00000504000 LINC00527Q9UJ94 153 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 AGRNO00468 2067 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 SPTBN2O15020 2390 aa11.26□□□□□ -0.61
SNF8-203ENST00000504000 TRBV6-5A0A0K0K1A5 114 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 J3KRW8 73 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 IGLV1-40P01703 118 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 HERVK_113P61574 105 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 SCGB2A2Q13296 93 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 RHPN1-AS1Q9BWJ2 59 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 A6NDX4 124 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 PMVKQ15126 192 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
SNF8-203ENST00000504000 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
SNF8-203ENST00000504000 GAGE12HA6NDE8 117 aa11.24□□□□□ -0.61
SNF8-203ENST00000504000 ID1P41134 155 aa11.24□□□□□ -0.61
SNF8-203ENST00000504000 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
SNF8-203ENST00000504000 ZFP2Q6ZN57 461 aa11.24□□□□□ -0.61
SNF8-203ENST00000504000 DUSP14O95147 198 aaKnown RBP11.23□□□□□ -0.61
SNF8-203ENST00000504000 TSHBP01222 138 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 C11orf86A6NJI1 115 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 LGALS9O00182 355 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 RPL11P62913 178 aaKnown RBP11.23□□□□□ -0.61
SNF8-203ENST00000504000 ETDBQ3ZM63 59 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 LYRM7Q5U5X0 104 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
SNF8-203ENST00000504000 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
SNF8-203ENST00000504000 F6UB75 175 aa11.22□□□□□ -0.61
SNF8-203ENST00000504000 IGHV4-39P01824 125 aa11.22□□□□□ -0.61
SNF8-203ENST00000504000 CD7P09564 240 aa11.22□□□□□ -0.61
SNF8-203ENST00000504000 DLX4Q92988 240 aaPredicted RBP11.22□□□□□ -0.61
SNF8-203ENST00000504000 TP53TG1Q9Y2A0 90 aa11.22□□□□□ -0.61
SNF8-203ENST00000504000 MED13LQ71F56 2210 aa11.22□□□□□ -0.61
SNF8-203ENST00000504000 RELNP78509 3460 aa11.22□□□□□ -0.61
SNF8-203ENST00000504000 NDUFS8O00217 210 aa11.21□□□□□ -0.61
SNF8-203ENST00000504000 SPRY2O43597 315 aa11.21□□□□□ -0.61
SNF8-203ENST00000504000 DEFB1P60022 68 aa11.21□□□□□ -0.61
SNF8-203ENST00000504000 CFHR3Q02985 330 aa11.21□□□□□ -0.61
SNF8-203ENST00000504000 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNF8-203ENST00000504000 AMTNQ6UX39 209 aa11.21□□□□□ -0.61
SNF8-203ENST00000504000 DCANP1Q8TF63 244 aa11.21□□□□□ -0.61
SNF8-203ENST00000504000 TSSC4Q9Y5U2 329 aaPredicted RBP11.21□□□□□ -0.61
SNF8-203ENST00000504000 A0A0J9YY99 117 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 PF4V1P10720 104 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 AZU1P20160 251 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 UBE2D3P61077 147 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 UBE2D2P62837 147 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 ZNF876PQ49A33 203 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 CFAP126Q5VTH2 177 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 SUMO4Q6EEV6 95 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 PIMREGQ9BSJ6 248 aa11.21□□□□□ -0.62
SNF8-203ENST00000504000 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.62
SNF8-203ENST00000504000 LCNL1Q6ZST4 164 aa11.2□□□□□ -0.62
SNF8-203ENST00000504000 SH2D6Q7Z4S9 175 aa11.2□□□□□ -0.62
SNF8-203ENST00000504000 PLEKHB2Q96CS7 222 aa11.2□□□□□ -0.62
SNF8-203ENST00000504000 IGHV3OR16-10A0A075B7F0 116 aa11.19□□□□□ -0.62
SNF8-203ENST00000504000 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
SNF8-203ENST00000504000 IGHV3-11P01762 117 aa11.19□□□□□ -0.62
SNF8-203ENST00000504000 SLC25A29Q8N8R3 303 aa11.19□□□□□ -0.62
SNF8-203ENST00000504000 C9orf85Q96MD7 179 aa11.19□□□□□ -0.62
SNF8-203ENST00000504000 RHOHQ15669 191 aa11.19□□□□□ -0.62
SNF8-203ENST00000504000 NFE4Q86UQ8 179 aa11.19□□□□□ -0.62
SNF8-203ENST00000504000 MUC4Q99102 2169 aa11.18□□□□□ -0.62
SNF8-203ENST00000504000 TRBV20-1A0A075B6N2 111 aa11.18□□□□□ -0.62
SNF8-203ENST00000504000 H3BUX3 64 aa11.18□□□□□ -0.62
SNF8-203ENST00000504000 TSPAN13O95857 204 aa11.18□□□□□ -0.62
SNF8-203ENST00000504000 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
SNF8-203ENST00000504000 C10orf105Q8TEF2 133 aa11.18□□□□□ -0.62
SNF8-203ENST00000504000 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms