RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CACNG7P62955 275 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 HBBP68871 147 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
VPS26A-209ENST00000497564 GNB1LQ9BYB4 327 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 TP53TG3Q9ULZ0 132 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 H3BVH4 76 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 MT-ND6P03923 174 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 S100A8P05109 93 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
VPS26A-209ENST00000497564 APOC4P55056 127 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 C9orf85Q96MD7 179 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 LINC01587Q99440 93 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 TPPP3Q9BW30 176 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 GOLT1BQ9Y3E0 138 aa10.3□□□□□ -0.76
VPS26A-209ENST00000497564 NXPH4O95158 308 aa10.29□□□□□ -0.76
VPS26A-209ENST00000497564 HLA-DQA1P01909 254 aa10.29□□□□□ -0.76
VPS26A-209ENST00000497564 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
VPS26A-209ENST00000497564 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
VPS26A-209ENST00000497564 TMEM136Q6ZRR5 245 aa10.29□□□□□ -0.76
VPS26A-209ENST00000497564 KMT2CQ8NEZ4 4911 aaKnown RBP10.28□□□□□ -0.76
VPS26A-209ENST00000497564 DNAH7Q8WXX0 4024 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 CBY3A6NI87 242 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 TMEM208Q9BTX3 173 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 NACAE9PAV3 2078 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 NBEAL2Q6ZNJ1 2754 aa10.28□□□□□ -0.76
VPS26A-209ENST00000497564 SNURFLB1AK76 121 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 UBE2CO00762 179 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 PHOX2AO14813 284 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 NTF3P20783 257 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 CAMPP49913 170 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
VPS26A-209ENST00000497564 TRGC2P03986 189 aa10.26□□□□□ -0.77
VPS26A-209ENST00000497564 ZFP82Q8N141 532 aa10.26□□□□□ -0.77
VPS26A-209ENST00000497564 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
VPS26A-209ENST00000497564 PTH2Q96A98 100 aa10.26□□□□□ -0.77
VPS26A-209ENST00000497564 TRAPPC1Q9Y5R8 145 aa10.26□□□□□ -0.77
VPS26A-209ENST00000497564 C1orf196B1AJZ1 125 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 TWIST1Q15672 202 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 PIK3CD-AS1Q5SR53 167 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 SPANXN1Q5VSR9 72 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
VPS26A-209ENST00000497564 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
VPS26A-209ENST00000497564 SPXQ9BT56 116 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 TMEM191AQ9H0A3 160 aa10.25□□□□□ -0.77
VPS26A-209ENST00000497564 MRPL18Q9H0U6 180 aaKnown RBP10.25□□□□□ -0.77
VPS26A-209ENST00000497564 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
VPS26A-209ENST00000497564 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
VPS26A-209ENST00000497564 RAB4BP61018 213 aa10.24□□□□□ -0.77
VPS26A-209ENST00000497564 FABP9Q0Z7S8 132 aa10.24□□□□□ -0.77
VPS26A-209ENST00000497564 SBSPONQ8IVN8 264 aa10.24□□□□□ -0.77
VPS26A-209ENST00000497564 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
VPS26A-209ENST00000497564 TIMM8BQ9Y5J9 83 aaPredicted RBP10.24□□□□□ -0.77
VPS26A-209ENST00000497564 IGHV3OR16-12A0A075B7B8 117 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 TRGC1P0CF51 173 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 HTN1P15515 57 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 RAB5BP61020 215 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 SLAQ13239 276 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 Q6ZWC4 215 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 FRZBQ92765 325 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 C16orf74Q96GX8 76 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 NDUFAF3Q9BU61 184 aa10.23□□□□□ -0.77
VPS26A-209ENST00000497564 M0R2P5 195 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 M0R381 172 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 APCSP02743 223 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 PRM2P04554 102 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 AZU1P20160 251 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 FAM104BQ5XKR9 115 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 RCHY1Q96PM5 261 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
VPS26A-209ENST00000497564 SPRY2O43597 315 aa10.21□□□□□ -0.77
VPS26A-209ENST00000497564 SSTP61278 116 aa10.21□□□□□ -0.77
VPS26A-209ENST00000497564 AP1S3Q96PC3 154 aa10.21□□□□□ -0.77
VPS26A-209ENST00000497564 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
VPS26A-209ENST00000497564 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
VPS26A-209ENST00000497564 U3KQK5 164 aa10.21□□□□□ -0.77
VPS26A-209ENST00000497564 X6R8D5 127 aa10.21□□□□□ -0.77
VPS26A-209ENST00000497564 PLAC8L1A1L4L8 177 aa10.2□□□□□ -0.78
VPS26A-209ENST00000497564 NHLRC4P0CG21 123 aaPredicted RBP10.2□□□□□ -0.78
VPS26A-209ENST00000497564 DAZ2Q13117 558 aaKnown RBP10.2□□□□□ -0.78
VPS26A-209ENST00000497564 DEFB135Q30KP9 77 aa10.2□□□□□ -0.78
VPS26A-209ENST00000497564 RNF183Q96D59 192 aa10.2□□□□□ -0.78
VPS26A-209ENST00000497564 HIST1H2BKO60814 126 aa10.19□□□□□ -0.78
VPS26A-209ENST00000497564 HIST1H2BJP06899 126 aa10.19□□□□□ -0.78
VPS26A-209ENST00000497564 EVI2AP22794 236 aa10.19□□□□□ -0.78
VPS26A-209ENST00000497564 HIST1H2BOP23527 126 aa10.19□□□□□ -0.78
VPS26A-209ENST00000497564 HIST1H2BBP33778 126 aa10.19□□□□□ -0.78
VPS26A-209ENST00000497564 HIST1H2BDP58876 126 aa10.19□□□□□ -0.78
VPS26A-209ENST00000497564 HIST1H2BCP62807 126 aa10.19□□□□□ -0.78
VPS26A-209ENST00000497564 HIST2H2BEQ16778 126 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms