RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NUP35Q8NFH5 326 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 C9orf85Q96MD7 179 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 URGCP-MRPS24S4R325 110 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 PLAC8L1A1L4L8 177 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 SNAI2O43623 268 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 SCO1O75880 301 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 CTRLP40313 264 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 TMEM88Q6PEY1 159 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 LYZL1Q6UWQ5 148 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 PGLYRP4Q96LB8 373 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 SCRT2Q9NQ03 307 aa15.64■□□□□ 0.1
VCPKMT-204ENST00000491402 MIFP14174 115 aa15.64■□□□□ 0.09
VCPKMT-204ENST00000491402 CBLN2Q8IUK8 224 aa15.64■□□□□ 0.09
VCPKMT-204ENST00000491402 SPATA25Q9BR10 227 aa15.64■□□□□ 0.09
VCPKMT-204ENST00000491402 F2Z2F3 143 aa15.63■□□□□ 0.09
VCPKMT-204ENST00000491402 KCNIP4Q6PIL6 250 aa15.63■□□□□ 0.09
VCPKMT-204ENST00000491402 Q8NAQ8 132 aa15.63■□□□□ 0.09
VCPKMT-204ENST00000491402 IL17DQ8TAD2 202 aa15.63■□□□□ 0.09
VCPKMT-204ENST00000491402 MUC21A0A0G2JKD1 596 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 MUC21A0A140T8X8 626 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 S100PP25815 95 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 OR10AG1Q8NH19 301 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 SMCO4Q9NRQ5 59 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 PHLDA3Q9Y5J5 127 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 IGHV4-28A0A0C4DH34 117 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 SNURFLB1AK76 121 aa15.62■□□□□ 0.09
VCPKMT-204ENST00000491402 CNFNQ9BYD5 112 aa15.61■□□□□ 0.09
VCPKMT-204ENST00000491402 SPINK4O60575 86 aa15.6■□□□□ 0.09
VCPKMT-204ENST00000491402 NHLRC4P0CG21 123 aaPredicted RBP15.6■□□□□ 0.09
VCPKMT-204ENST00000491402 SSTP61278 116 aa15.6■□□□□ 0.09
VCPKMT-204ENST00000491402 ZMAT4Q9H898 229 aa15.6■□□□□ 0.09
VCPKMT-204ENST00000491402 EMP1P54849 157 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 SPXQ9BT56 116 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 NOP10Q9NPE3 64 aaKnown RBP15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 A0A1B0GUT8 65 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 M0R381 172 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 DEFB4AO15263 64 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 DAZ2Q13117 558 aaKnown RBP15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 ELOBQ15370 118 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 SPANXN1Q5VSR9 72 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 BORCS7Q96B45 105 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 BTF3L4Q96K17 158 aa15.59■□□□□ 0.09
VCPKMT-204ENST00000491402 M0R2P5 195 aa15.58■□□□□ 0.08
VCPKMT-204ENST00000491402 DMRTA1Q5VZB9 504 aa15.58■□□□□ 0.08
VCPKMT-204ENST00000491402 TRAV9-1A0A075B6T8 112 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 NTF3P20783 257 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 ZFP82Q8N141 532 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 NXPH4O95158 308 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 CACNG7P62955 275 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 ZNF876PQ49A33 203 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 MRPL54Q6P161 138 aaKnown RBP15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 WDR73Q6P4I2 378 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 YPEL4Q96NS1 127 aa15.57■□□□□ 0.08
VCPKMT-204ENST00000491402 IGHV4-4A0A075B6R2 117 aa15.56■□□□□ 0.08
VCPKMT-204ENST00000491402 MRPL16Q9NX20 251 aaKnown RBP15.56■□□□□ 0.08
VCPKMT-204ENST00000491402 STAB2Q8WWQ8 2551 aa15.56■□□□□ 0.08
VCPKMT-204ENST00000491402 HUWE1Q7Z6Z7 4374 aaKnown RBP15.55■□□□□ 0.08
VCPKMT-204ENST00000491402 TWIST1Q15672 202 aa15.55■□□□□ 0.08
VCPKMT-204ENST00000491402 SYT8Q8NBV8 401 aa15.55■□□□□ 0.08
VCPKMT-204ENST00000491402 MSRB1Q9NZV6 116 aa15.55■□□□□ 0.08
VCPKMT-204ENST00000491402 TRGV1A0A0A0MS02 117 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 TGIF2-C20orf24A0A0A6YYL0 155 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 RIGQ13278 110 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 LGALS9BQ3B8N2 356 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 ATP5L2Q7Z4Y8 100 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 RASL10AQ92737 203 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 PTH2Q96A98 100 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 Q6ZTI0 123 aa15.54■□□□□ 0.08
VCPKMT-204ENST00000491402 TRBV24-1A0A075B6N3 115 aa15.53■□□□□ 0.08
VCPKMT-204ENST00000491402 A0A1B0GXF2 115 aa15.53■□□□□ 0.08
VCPKMT-204ENST00000491402 C11orf68Q9H3H3 251 aaKnown RBP15.53■□□□□ 0.08
VCPKMT-204ENST00000491402 HBBP68871 147 aa15.52■□□□□ 0.08
VCPKMT-204ENST00000491402 PIK3CD-AS1Q5SR53 167 aa15.52■□□□□ 0.08
VCPKMT-204ENST00000491402 FAM222AQ5U5X8 452 aa15.52■□□□□ 0.08
VCPKMT-204ENST00000491402 DKK2Q9UBU2 259 aa15.52■□□□□ 0.08
VCPKMT-204ENST00000491402 LYRM9A8MSI8 78 aa15.52■□□□□ 0.07
VCPKMT-204ENST00000491402 CAMPP49913 170 aa15.52■□□□□ 0.07
VCPKMT-204ENST00000491402 U3KQK5 164 aa15.52■□□□□ 0.07
VCPKMT-204ENST00000491402 NACAE9PAV3 2078 aa15.51■□□□□ 0.07
VCPKMT-204ENST00000491402 A0A1B0GW15 77 aa15.51■□□□□ 0.07
VCPKMT-204ENST00000491402 NDUFAF3Q9BU61 184 aa15.51■□□□□ 0.07
VCPKMT-204ENST00000491402 A0A0J9YWU9 116 aa15.5■□□□□ 0.07
VCPKMT-204ENST00000491402 CELA1Q9UNI1 258 aa15.5■□□□□ 0.07
VCPKMT-204ENST00000491402 GAGE12BA1L429 117 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 GAGE7O76087 117 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 GAGE12FP0CL80 117 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 GAGE12GP0CL81 117 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 GAGE12IP0CL82 117 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 LINC00612Q8N6U2 182 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 FAM210BQ96KR6 192 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 AP1S3Q96PC3 154 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 JPT2Q9H910 190 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 TRGC1P0CF51 173 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 RASL11AQ6T310 242 aa15.49■□□□□ 0.07
VCPKMT-204ENST00000491402 SPART-AS1P0CW21 52 aa15.48■□□□□ 0.07
VCPKMT-204ENST00000491402 EVI2AP22794 236 aa15.48■□□□□ 0.07
VCPKMT-204ENST00000491402 COLCA2A8K830 154 aa15.47■□□□□ 0.07
VCPKMT-204ENST00000491402 A8MWV9 139 aa15.47■□□□□ 0.07
VCPKMT-204ENST00000491402 S100A8P05109 93 aa15.47■□□□□ 0.07
VCPKMT-204ENST00000491402 DEFB130BP0DP73 79 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms