RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 C16orf74Q96GX8 76 aa11.54□□□□□ -0.56
CLDN11-208ENST00000488989 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
CLDN11-208ENST00000488989 NBEAL2Q6ZNJ1 2754 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 SCO1O75880 301 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 MIFP14174 115 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 S100PP25815 95 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 ELOBQ15370 118 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 TMEM88Q6PEY1 159 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 LYZL1Q6UWQ5 148 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 CBLN2Q8IUK8 224 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 PTH2Q96A98 100 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 SPXQ9BT56 116 aa11.53□□□□□ -0.56
CLDN11-208ENST00000488989 IGHV4-4A0A075B6R2 117 aa11.52□□□□□ -0.57
CLDN11-208ENST00000488989 NXPH4O95158 308 aa11.52□□□□□ -0.57
CLDN11-208ENST00000488989 BTF3L4Q96K17 158 aa11.52□□□□□ -0.57
CLDN11-208ENST00000488989 GSN-AS1Q9NRJ2 163 aa11.52□□□□□ -0.57
CLDN11-208ENST00000488989 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
CLDN11-208ENST00000488989 CACNG7P62955 275 aa11.51□□□□□ -0.57
CLDN11-208ENST00000488989 DAZ2Q13117 558 aaKnown RBP11.51□□□□□ -0.57
CLDN11-208ENST00000488989 PIK3CD-AS1Q5SR53 167 aa11.51□□□□□ -0.57
CLDN11-208ENST00000488989 Q8NAQ8 132 aa11.51□□□□□ -0.57
CLDN11-208ENST00000488989 B9D2Q9BPU9 175 aa11.51□□□□□ -0.57
CLDN11-208ENST00000488989 SPATA25Q9BR10 227 aa11.51□□□□□ -0.57
CLDN11-208ENST00000488989 URGCP-MRPS24S4R325 110 aa11.51□□□□□ -0.57
CLDN11-208ENST00000488989 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
CLDN11-208ENST00000488989 DEFA6Q01524 100 aa11.5□□□□□ -0.57
CLDN11-208ENST00000488989 ATP5L2Q7Z4Y8 100 aa11.5□□□□□ -0.57
CLDN11-208ENST00000488989 OR10AG1Q8NH19 301 aa11.5□□□□□ -0.57
CLDN11-208ENST00000488989 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
CLDN11-208ENST00000488989 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
CLDN11-208ENST00000488989 NACAE9PAV3 2078 aa11.5□□□□□ -0.57
CLDN11-208ENST00000488989 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 M0R2P5 195 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 RIGQ13278 110 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 ZFP82Q8N141 532 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 BORCS7Q96B45 105 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 NDUFAF3Q9BU61 184 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 RETNQ9HD89 108 aa11.49□□□□□ -0.57
CLDN11-208ENST00000488989 IGHV4-28A0A0C4DH34 117 aa11.48□□□□□ -0.57
CLDN11-208ENST00000488989 A0A1B0GW15 77 aa11.48□□□□□ -0.57
CLDN11-208ENST00000488989 SPINK4O60575 86 aa11.48□□□□□ -0.57
CLDN11-208ENST00000488989 LGALS9BQ3B8N2 356 aa11.48□□□□□ -0.57
CLDN11-208ENST00000488989 TIMM8BQ9Y5J9 83 aaPredicted RBP11.48□□□□□ -0.57
CLDN11-208ENST00000488989 PRKDCP78527 4128 aaKnown RBP11.47□□□□□ -0.57
CLDN11-208ENST00000488989 NTF3P20783 257 aa11.47□□□□□ -0.57
CLDN11-208ENST00000488989 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
CLDN11-208ENST00000488989 DMRTA1Q5VZB9 504 aa11.47□□□□□ -0.57
CLDN11-208ENST00000488989 RASL11AQ6T310 242 aa11.47□□□□□ -0.57
CLDN11-208ENST00000488989 GATD1Q8NB37 220 aa11.47□□□□□ -0.57
CLDN11-208ENST00000488989 SYT8Q8NBV8 401 aa11.47□□□□□ -0.57
CLDN11-208ENST00000488989 RASL10AQ92737 203 aa11.47□□□□□ -0.57
CLDN11-208ENST00000488989 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
CLDN11-208ENST00000488989 MUC21A0A0G2JKD1 596 aa11.46□□□□□ -0.57
CLDN11-208ENST00000488989 MUC21A0A140T8X8 626 aa11.46□□□□□ -0.57
CLDN11-208ENST00000488989 COLCA2A8K830 154 aa11.46□□□□□ -0.57
CLDN11-208ENST00000488989 MRPL54Q6P161 138 aaKnown RBP11.46□□□□□ -0.57
CLDN11-208ENST00000488989 LINC00612Q8N6U2 182 aa11.46□□□□□ -0.57
CLDN11-208ENST00000488989 C11orf68Q9H3H3 251 aaKnown RBP11.46□□□□□ -0.57
CLDN11-208ENST00000488989 NOP10Q9NPE3 64 aaKnown RBP11.46□□□□□ -0.57
CLDN11-208ENST00000488989 M0R381 172 aa11.45□□□□□ -0.58
CLDN11-208ENST00000488989 HBBP68871 147 aa11.45□□□□□ -0.58
CLDN11-208ENST00000488989 ZNF876PQ49A33 203 aa11.45□□□□□ -0.58
CLDN11-208ENST00000488989 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
CLDN11-208ENST00000488989 LYRM9A8MSI8 78 aa11.44□□□□□ -0.58
CLDN11-208ENST00000488989 S100A8P05109 93 aa11.44□□□□□ -0.58
CLDN11-208ENST00000488989 TWIST1Q15672 202 aa11.44□□□□□ -0.58
CLDN11-208ENST00000488989 COX19Q49B96 90 aa11.44□□□□□ -0.58
CLDN11-208ENST00000488989 FAM210BQ96KR6 192 aa11.44□□□□□ -0.58
CLDN11-208ENST00000488989 ZMAT4Q9H898 229 aa11.44□□□□□ -0.58
CLDN11-208ENST00000488989 TENM3Q9P273 2699 aa11.44□□□□□ -0.58
CLDN11-208ENST00000488989 TRGC1P0CF51 173 aa11.43□□□□□ -0.58
CLDN11-208ENST00000488989 Q6ZTI0 123 aa11.43□□□□□ -0.58
CLDN11-208ENST00000488989 C18orf15Q96N68 181 aa11.43□□□□□ -0.58
CLDN11-208ENST00000488989 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
CLDN11-208ENST00000488989 MRPL16Q9NX20 251 aaKnown RBP11.43□□□□□ -0.58
CLDN11-208ENST00000488989 DKK2Q9UBU2 259 aa11.43□□□□□ -0.58
CLDN11-208ENST00000488989 TRGV1A0A0A0MS02 117 aa11.42□□□□□ -0.58
CLDN11-208ENST00000488989 A8MWV9 139 aa11.42□□□□□ -0.58
CLDN11-208ENST00000488989 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
CLDN11-208ENST00000488989 SSTP61278 116 aa11.42□□□□□ -0.58
CLDN11-208ENST00000488989 AP1S3Q96PC3 154 aa11.42□□□□□ -0.58
CLDN11-208ENST00000488989 GNB1LQ9BYB4 327 aa11.42□□□□□ -0.58
CLDN11-208ENST00000488989 KIF25-AS1Q9Y6Z4 181 aa11.42□□□□□ -0.58
CLDN11-208ENST00000488989 MEGF8Q7Z7M0 2845 aa11.42□□□□□ -0.58
CLDN11-208ENST00000488989 TEX48A0A1B0GUV7 120 aa11.41□□□□□ -0.58
CLDN11-208ENST00000488989 DEFB4AO15263 64 aa11.41□□□□□ -0.58
CLDN11-208ENST00000488989 RS1O15537 224 aa11.41□□□□□ -0.58
CLDN11-208ENST00000488989 CAMPP49913 170 aa11.41□□□□□ -0.58
CLDN11-208ENST00000488989 EMP1P54849 157 aa11.41□□□□□ -0.58
CLDN11-208ENST00000488989 FAM222AQ5U5X8 452 aa11.41□□□□□ -0.58
CLDN11-208ENST00000488989 TMEM136Q6ZRR5 245 aa11.41□□□□□ -0.58
CLDN11-208ENST00000488989 CRYGDP07320 174 aa11.4□□□□□ -0.58
CLDN11-208ENST00000488989 EVI2AP22794 236 aa11.4□□□□□ -0.58
CLDN11-208ENST00000488989 UFSP1Q6NVU6 142 aa11.4□□□□□ -0.58
CLDN11-208ENST00000488989 POM121L12Q8N7R1 296 aa11.4□□□□□ -0.58
CLDN11-208ENST00000488989 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.58
CLDN11-208ENST00000488989 JPT2Q9H910 190 aa11.4□□□□□ -0.58
CLDN11-208ENST00000488989 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms