RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ANK2Q01484 3957 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 MT-ND6P03923 174 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 TWIST1Q15672 202 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 SMIM15Q7Z3B0 74 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 ZFP82Q8N141 532 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 SYT8Q8NBV8 401 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 TMEM263Q8WUH6 116 aaKnown RBP9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 PTH2Q96A98 100 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 RCHY1Q96PM5 261 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 MDFICQ9P1T7 246 aa9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 TIMM8BQ9Y5J9 83 aaPredicted RBP9.62□□□□□ -0.87
VTI1BP1-201ENST00000486325 A0A1B0GXF2 115 aa9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 RPS10P46783 165 aaKnown RBP9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 CAMPP49913 170 aa9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 RNF183Q96D59 192 aa9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 C16orf74Q96GX8 76 aa9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
VTI1BP1-201ENST00000486325 SNURFLB1AK76 121 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 HLA-DQA1P01909 254 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 FRMD6-AS1P0C7T7 363 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 RAB4BP61018 213 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 NDUFAF3Q9BU61 184 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 GSN-AS1Q9NRJ2 163 aa9.6□□□□□ -0.87
VTI1BP1-201ENST00000486325 M0R2P5 195 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 SPRY2O43597 315 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 AZU1P20160 251 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 DEFB135Q30KP9 77 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 DEFB121Q5J5C9 76 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 C11orf72Q8NBR9 251 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 RNASE8Q8TDE3 154 aaKnown RBP9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 TRAPPC1Q9Y5R8 145 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 NOTCH1P46531 2555 aa9.59□□□□□ -0.87
VTI1BP1-201ENST00000486325 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 K7EIL1 84 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 M0R381 172 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 NXPH4O95158 308 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 SSTP61278 116 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 DAZ2Q13117 558 aaKnown RBP9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 LGALS9BQ3B8N2 356 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 ZNF876PQ49A33 203 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 TMEM136Q6ZRR5 245 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 OR11H2Q8NH07 326 aa9.58□□□□□ -0.88
VTI1BP1-201ENST00000486325 PRM2P04554 102 aa9.57□□□□□ -0.88
VTI1BP1-201ENST00000486325 MIFP14174 115 aa9.57□□□□□ -0.88
VTI1BP1-201ENST00000486325 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
VTI1BP1-201ENST00000486325 OVOL2Q9BRP0 275 aa9.57□□□□□ -0.88
VTI1BP1-201ENST00000486325 X6R8D5 127 aa9.57□□□□□ -0.88
VTI1BP1-201ENST00000486325 APCSP02743 223 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 FABP9Q0Z7S8 132 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 RASL10AQ92737 203 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 FRZBQ92765 325 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 AP1S3Q96PC3 154 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 MSRB1Q9NZV6 116 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 NBEAL1Q6ZS30 2694 aa9.56□□□□□ -0.88
VTI1BP1-201ENST00000486325 A8MWV9 139 aa9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 C1orf196B1AJZ1 125 aa9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 PRB2P02812 416 aaPredicted RBP9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 TRGC2P03986 189 aa9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 FAM104BQ5XKR9 115 aa9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 IL17DQ8TAD2 202 aa9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 MUC4Q99102 2169 aa9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 CMYA5Q8N3K9 4069 aa9.55□□□□□ -0.88
VTI1BP1-201ENST00000486325 CIDEAO60543 219 aa9.54□□□□□ -0.88
VTI1BP1-201ENST00000486325 EVI2AP22794 236 aa9.54□□□□□ -0.88
VTI1BP1-201ENST00000486325 DPH3P1Q9H4G8 78 aa9.54□□□□□ -0.88
VTI1BP1-201ENST00000486325 NOP10Q9NPE3 64 aaKnown RBP9.54□□□□□ -0.88
VTI1BP1-201ENST00000486325 PLAC8L1A1L4L8 177 aa9.53□□□□□ -0.88
VTI1BP1-201ENST00000486325 PPBPP02775 128 aa9.53□□□□□ -0.88
VTI1BP1-201ENST00000486325 C14orf178Q8N769 122 aaPredicted RBP9.53□□□□□ -0.88
VTI1BP1-201ENST00000486325 TRGV1A0A0A0MS02 117 aa9.52□□□□□ -0.89
VTI1BP1-201ENST00000486325 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
VTI1BP1-201ENST00000486325 RAB4AP20338 218 aa9.52□□□□□ -0.89
VTI1BP1-201ENST00000486325 RAB5BP61020 215 aa9.52□□□□□ -0.89
VTI1BP1-201ENST00000486325 SPATA25Q9BR10 227 aa9.52□□□□□ -0.89
VTI1BP1-201ENST00000486325 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 TEX48A0A1B0GUV7 120 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 RHODO00212 210 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 RS1O15537 224 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 EMP1P54849 157 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 SLAQ13239 276 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 AMN1Q8IY45 258 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 Q8NAQ8 132 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 MRAPQ8TCY5 172 aa9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
VTI1BP1-201ENST00000486325 PPP1R17O96001 155 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 CRYGDP07320 174 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 CKS2P33552 79 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 ZFP2Q6ZN57 461 aa9.5□□□□□ -0.89
VTI1BP1-201ENST00000486325 Q6ZTI0 123 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms