RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 A0A1B0GXF2 115 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 GRIFINA4D1Z8 144 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 COLCA2A8K830 154 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 GNRH2O43555 120 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 SCO1O75880 301 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 NXPH4O95158 308 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 FRMD6-AS1P0C7T7 363 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 TRGC1P0CF51 173 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 RNASE3P12724 160 aaKnown RBP7.37□□□□□ -1.23
USP39-215ENST00000481409 MIFP14174 115 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 TCL1AP56279 114 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 DAZ2Q13117 558 aaKnown RBP7.37□□□□□ -1.23
USP39-215ENST00000481409 LGALS9BQ3B8N2 356 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 SPANXN1Q5VSR9 72 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 Q6ZQT7 251 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 SMIM15Q7Z3B0 74 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 GATD1Q8NB37 220 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 RNASE8Q8TDE3 154 aaKnown RBP7.37□□□□□ -1.23
USP39-215ENST00000481409 FRZBQ92765 325 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 PGLYRP4Q96LB8 373 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 GNB1LQ9BYB4 327 aa7.37□□□□□ -1.23
USP39-215ENST00000481409 SNURFLB1AK76 121 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 H3BVH4 76 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 M0R2P5 195 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 CIDEAO60543 219 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 HLA-DQA1P01909 254 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 GZMBP10144 247 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 C11orf72Q8NBR9 251 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 IL17DQ8TAD2 202 aa7.36□□□□□ -1.23
USP39-215ENST00000481409 IGHV3OR16-12A0A075B7B8 117 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 TGIF2-C20orf24A0A0A6YYL0 155 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 TEX48A0A1B0GUV7 120 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 K7EIL1 84 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 SPRY2O43597 315 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 RAB5AP20339 215 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 NTF3P20783 257 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 RASL10AQ92737 203 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 OVOL2Q9BRP0 275 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 TPPP3Q9BW30 176 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
USP39-215ENST00000481409 TIMM8BQ9Y5J9 83 aaPredicted RBP7.35□□□□□ -1.23
USP39-215ENST00000481409 A8MWV9 139 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 HTN1P15515 57 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 TWIST1Q15672 202 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 DEFB135Q30KP9 77 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 OR11H2Q8NH07 326 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 AP1S3Q96PC3 154 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 SPATA25Q9BR10 227 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 TMEM191AQ9H0A3 160 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 MDFICQ9P1T7 246 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 X6R8D5 127 aa7.34□□□□□ -1.23
USP39-215ENST00000481409 LYRM9A8MSI8 78 aa7.33□□□□□ -1.24
USP39-215ENST00000481409 MRPL54Q6P161 138 aaKnown RBP7.33□□□□□ -1.24
USP39-215ENST00000481409 OR10AG1Q8NH19 301 aa7.33□□□□□ -1.24
USP39-215ENST00000481409 C18orf15Q96N68 181 aa7.33□□□□□ -1.24
USP39-215ENST00000481409 GSN-AS1Q9NRJ2 163 aa7.33□□□□□ -1.24
USP39-215ENST00000481409 M0R381 172 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 RHODO00212 210 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 SPINK4O60575 86 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 SMIM17P0DL12 118 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 AZU1P20160 251 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 SMCPP49901 116 aaPredicted RBP7.32□□□□□ -1.24
USP39-215ENST00000481409 ZNF876PQ49A33 203 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 DEFB121Q5J5C9 76 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 TMEM136Q6ZRR5 245 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 TM2D3Q9BRN9 247 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 DPH3P1Q9H4G8 78 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 PKD1L1Q8TDX9 2849 aa7.32□□□□□ -1.24
USP39-215ENST00000481409 PLAC8L1A1L4L8 177 aa7.31□□□□□ -1.24
USP39-215ENST00000481409 PPP1R17O96001 155 aa7.31□□□□□ -1.24
USP39-215ENST00000481409 PPBPP02775 128 aa7.31□□□□□ -1.24
USP39-215ENST00000481409 RPS10P46783 165 aaKnown RBP7.31□□□□□ -1.24
USP39-215ENST00000481409 CAMPP49913 170 aa7.31□□□□□ -1.24
USP39-215ENST00000481409 ZFP2Q6ZN57 461 aa7.31□□□□□ -1.24
USP39-215ENST00000481409 C11orf68Q9H3H3 251 aaKnown RBP7.31□□□□□ -1.24
USP39-215ENST00000481409 ZMAT4Q9H898 229 aa7.31□□□□□ -1.24
USP39-215ENST00000481409 TRAPPC1Q9Y5R8 145 aa7.31□□□□□ -1.24
USP39-215ENST00000481409 APCSP02743 223 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 NHLRC4P0CG21 123 aaPredicted RBP7.3□□□□□ -1.24
USP39-215ENST00000481409 RAB4BP61018 213 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 FAM104BQ5XKR9 115 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 LINC00612Q8N6U2 182 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 Q8NAQ8 132 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 MRAPQ8TCY5 172 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 MRAP2Q96G30 205 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 LAMTOR2Q9Y2Q5 125 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 CMYA5Q8N3K9 4069 aa7.3□□□□□ -1.24
USP39-215ENST00000481409 TRAV4A0A0B4J268 109 aa7.29□□□□□ -1.24
USP39-215ENST00000481409 IGHV4-28A0A0C4DH34 117 aa7.29□□□□□ -1.24
USP39-215ENST00000481409 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
USP39-215ENST00000481409 SBSPONQ8IVN8 264 aa7.29□□□□□ -1.24
USP39-215ENST00000481409 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
USP39-215ENST00000481409 EDA2RQ9HAV5 297 aa7.29□□□□□ -1.24
USP39-215ENST00000481409 NOP10Q9NPE3 64 aaKnown RBP7.29□□□□□ -1.24
USP39-215ENST00000481409 MSRB1Q9NZV6 116 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms