RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 MUC21A0A0G2JKD1 596 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 MUC21A0A140T8X8 626 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 TSKUQ8WUA8 353 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 GTSF1Q8WW33 167 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 NEU1Q99519 415 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 GSN-AS1Q9NRJ2 163 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 IL36BQ9NZH7 164 aa8.42□□□□□ -1.06
PDCD11-204ENST00000478543 DEFB4AO15263 64 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 SCO1O75880 301 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 CXCL1P09341 107 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 ARMS2P0C7Q2 107 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
PDCD11-204ENST00000478543 EMP1P54849 157 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 FAM3BP58499 235 aaPredicted RBP8.41□□□□□ -1.06
PDCD11-204ENST00000478543 SSTP61278 116 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 FER1L6-AS1Q8NA97 138 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
PDCD11-204ENST00000478543 C16orf74Q96GX8 76 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 PGLYRP4Q96LB8 373 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 SPATA25Q9BR10 227 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 TP53TG1Q9Y2A0 90 aa8.41□□□□□ -1.06
PDCD11-204ENST00000478543 IGHV4-28A0A0C4DH34 117 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 SMIM27A0A1W2PRY6 76 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 SMIM9A6NGZ8 99 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 HIGD1CA8MV81 97 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 SNURFLB1AK76 121 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 C11orf72Q8NBR9 251 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 RNASE8Q8TDE3 154 aaKnown RBP8.4□□□□□ -1.06
PDCD11-204ENST00000478543 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 URGCP-MRPS24S4R325 110 aa8.4□□□□□ -1.06
PDCD11-204ENST00000478543 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 A0A1W2PPQ1 181 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 SPINK4O60575 86 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 MIFP14174 115 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 DNLZQ5SXM8 178 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 TMEM88Q6PEY1 159 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 Q8NAQ8 132 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 NUP35Q8NFH5 326 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 OR10AG1Q8NH19 301 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 C9orf85Q96MD7 179 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 GFRA4Q9GZZ7 299 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 PHLDA3Q9Y5J5 127 aa8.39□□□□□ -1.07
PDCD11-204ENST00000478543 PLAC8L1A1L4L8 177 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 M0R381 172 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 SNAI2O43623 268 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 MED14OSP0DP75 135 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 S100PP25815 95 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 CTRLP40313 264 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 KCNIP4Q6PIL6 250 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 ZMAT4Q9H898 229 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 NOP10Q9NPE3 64 aaKnown RBP8.38□□□□□ -1.07
PDCD11-204ENST00000478543 TMEM242Q9NWH2 141 aa8.38□□□□□ -1.07
PDCD11-204ENST00000478543 MRPL16Q9NX20 251 aaKnown RBP8.38□□□□□ -1.07
PDCD11-204ENST00000478543 FAM231BA6NCW3 169 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 OR5AL1P0C617 328 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
PDCD11-204ENST00000478543 IL17DQ8TAD2 202 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 BORCS7Q96B45 105 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 SPXQ9BT56 116 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 EDA2RQ9HAV5 297 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 SMCO4Q9NRQ5 59 aa8.37□□□□□ -1.07
PDCD11-204ENST00000478543 TRGV1A0A0A0MS02 117 aa8.36□□□□□ -1.07
PDCD11-204ENST00000478543 F2Z2F3 143 aa8.36□□□□□ -1.07
PDCD11-204ENST00000478543 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
PDCD11-204ENST00000478543 ZFP82Q8N141 532 aa8.36□□□□□ -1.07
PDCD11-204ENST00000478543 SSBP4Q9BWG4 385 aaPredicted RBP8.36□□□□□ -1.07
PDCD11-204ENST00000478543 A0A1B0GUT8 65 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 CXorf65A6NEN9 183 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 M0R2P5 195 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 CACNG7P62955 275 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 TWIST1Q15672 202 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 FAM222AQ5U5X8 452 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 DMRTA1Q5VZB9 504 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 Q6ZTI0 123 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 SYT8Q8NBV8 401 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 BTF3L4Q96K17 158 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 MSRB1Q9NZV6 116 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 CELA1Q9UNI1 258 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
PDCD11-204ENST00000478543 TGIF2-C20orf24A0A0A6YYL0 155 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 A0A0J9YWU9 116 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 GAGE12BA1L429 117 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 GAGE7O76087 117 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 GAGE12FP0CL80 117 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 GAGE12GP0CL81 117 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 GAGE12IP0CL82 117 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 NTF3P20783 257 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 DAZ2Q13117 558 aaKnown RBP8.34□□□□□ -1.07
PDCD11-204ENST00000478543 RIGQ13278 110 aa8.34□□□□□ -1.07
PDCD11-204ENST00000478543 ELOBQ15370 118 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms