RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ZNF737O75373 536 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 AKR1D1P51857 326 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 PCBD1P61457 104 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 BLCAPP62952 87 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 QRFPP83859 136 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 ZNF181Q2M3W8 571 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 C1orf134Q5TEV5 83 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 NCBP2-AS2Q69YL0 99 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 HAGHLQ6PII5 290 aaPredicted RBP2.22□□□□□ -2.05
VPS13D-207ENST00000476169 CLECL1Q8IZS7 167 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 LINC00311Q8N616 119 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 CLEC2BQ92478 149 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 LINC00470Q9BZP3 86 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 COMMD3Q9UBI1 195 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 UNC80Q8N2C7 3258 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 ARHGAP32A7KAX9 2087 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 MYO7AQ13402 2215 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 TRGV4A0A0C4DH28 118 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 ZNF727A8MUV8 499 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 B4DSR2 109 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 NPFFO15130 113 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 TSPAN19P0C672 248 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 SLC25A4P12235 298 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 HLA-DRB4P13762 266 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 MIFP14174 115 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 ROMO1P60602 79 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 SNRPD3P62318 126 aaKnown RBP2.21□□□□□ -2.06
VPS13D-207ENST00000476169 DIAPH2-AS1Q14236 149 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 ELOBQ15370 118 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 Q8N814 137 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 C9orf163Q8N9P6 203 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 OR5AK2Q8NH90 309 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 SFT2D1Q8WV19 159 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 MUCL1Q96DR8 90 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 C2orf88Q9BSF0 95 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 CST11Q9H112 138 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 U3KQA8 63 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 HLA-DRB4X5D2U9 266 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 XIRP2A4UGR9 3374 aa2.21□□□□□ -2.06
VPS13D-207ENST00000476169 COL6A3P12111 3177 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 TRAV27A0A087WT01 109 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 TRAV14DV4A0A0A6YYC5 116 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 LOC107984156A0A0G2JMH3 177 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 H3BRN7 92 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 TRACP01848 142 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 PIRTP0C851 137 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 SAA1P0DJI8 122 aaPredicted RBP2.2□□□□□ -2.06
VPS13D-207ENST00000476169 CKS2P33552 79 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
VPS13D-207ENST00000476169 DEFB113Q30KQ7 82 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 ARL17AQ8IVW1 177 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 OR4C6Q8NH72 309 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 CCL4L1Q8NHW4 92 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 GGACTQ9BVM4 153 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 MICAL3Q7RTP6 2002 aa2.2□□□□□ -2.06
VPS13D-207ENST00000476169 EYSQ5T1H1 3165 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 MUC6Q6W4X9 2439 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 SHANK1Q9Y566 2161 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 FAM236AA0A1B0GUQ0 79 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 FAM236BA0A1B0GV22 79 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 TCRBV4S1A1TA0A5B7 111 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 F8W036 122 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 CCL22O00626 93 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 IGLV1-51P01701 117 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 CD2P06729 351 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 P0C880 135 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 EMX2Q04743 252 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 DEFB133Q30KQ1 61 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 CLLU1Q5K131 121 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 GLIPR1L1Q6UWM5 242 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 TMEM91Q6ZNR0 172 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 PATE1Q8WXA2 126 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 TMEM203Q969S6 136 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 NAA38Q9BRA0 125 aaKnown RBP2.19□□□□□ -2.06
VPS13D-207ENST00000476169 GNG8Q9UK08 70 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 MUC3AQ02505 3323 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 PTPRBP23467 1997 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 CUL9Q8IWT3 2517 aa2.19□□□□□ -2.06
VPS13D-207ENST00000476169 PLXNA4Q9HCM2 1894 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 COL4A2P08572 1712 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 IGKV3D-11A0A0A0MRZ8 115 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 SPTY2D1-AS1A0A0U1RR47 76 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 MIF4GDA9UHW6 222 aaKnown RBP2.18□□□□□ -2.06
VPS13D-207ENST00000476169 ZNF670-ZNF695F2Z2N8 137 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 M0R129 80 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 NCR2O95944 276 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 RBP4P02753 201 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 S100PP25815 95 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 BRS3P32247 399 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 ETV6P41212 452 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 DSCR4P56555 118 aaPredicted RBP2.18□□□□□ -2.06
VPS13D-207ENST00000476169 HCP5Q6MZN7 132 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 C2orf82Q6UX34 121 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 TEN1Q86WV5 123 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 C10orf111Q8N326 155 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 OR10AC1Q8NH08 325 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 NABP2Q9BQ15 211 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 ANAPC1Q9H1A4 1944 aa2.18□□□□□ -2.06
VPS13D-207ENST00000476169 ZDBF2Q9HCK1 2354 aa2.17□□□□□ -2.06
VPS13D-207ENST00000476169 TSC2P49815 1807 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms