RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 A0A1B0GXF2 115 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 HIGD1CA8MV81 97 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 LGALS9O00182 355 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 HSBP1O75506 76 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 P01737 135 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 TCRAP04437 139 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 IGLC1P0CG04 106 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 FOXA3P55318 350 aaPredicted RBP3.16□□□□□ -1.9
VPS13D-206ENST00000476045 SYNJ2BPP57105 145 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 HBBP68871 147 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 RHOGP84095 191 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 KLK9Q2XQG4 91 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 MAJINQ3KP22 176 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 CASC10Q5T4H9 136 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 PVRIGQ6DKI7 326 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 Q6ZN92 141 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 SPATA12Q7Z6I5 190 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 Q86TA4 180 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 NRACQ8N912 160 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 C5orf17Q8NAS9 161 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 STXBP6Q8NFX7 210 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 PRSS3P2Q8NHM4 247 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 EEF1AKMT3Q96AZ1 226 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 URB1-AS1Q96HZ7 61 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 GPR82Q96P67 336 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 OTORQ9NRC9 128 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 THYN1Q9P016 225 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 ZNF492Q9P255 531 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 UQCR10Q9UDW1 63 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 KLK9Q9UKQ9 250 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 TIMM8BQ9Y5J9 83 aaPredicted RBP3.16□□□□□ -1.9
VPS13D-206ENST00000476045 F11RQ9Y624 299 aaKnown RBP3.16□□□□□ -1.9
VPS13D-206ENST00000476045 TMSB15BA0A087X1C1 80 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 TRBV7-1A0A0A6YYK4 115 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 TRAV25A0A0B4J276 109 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 C19orf71A6NCJ1 209 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 A8MWL6 223 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 I3L2K1 104 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 CHEK1O14757 476 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 OR2J3O76001 311 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 IGHV3-23P01764 117 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 IGLC2P0DOY2 106 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 IGLC3P0DOY3 106 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 PSG1P11464 419 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 CTRLP40313 264 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 HINT1P49773 126 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-206ENST00000476045 ZNF138P52744 262 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 ATP5G2Q06055 141 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 C15orf32Q32M92 178 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 FAM106AQ4KMX7 169 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 COL5A1-AS1Q5SY13 56 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 RASL11AQ6T310 242 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 RBPMS2Q6ZRY4 209 aaKnown RBP3.15□□□□□ -1.91
VPS13D-206ENST00000476045 SBSPONQ8IVN8 264 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 TTC9CQ8N5M4 171 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 GTSF1Q8WW33 167 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 FMC1Q96HJ9 113 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 C17orf77Q96MU5 243 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 TMEM208Q9BTX3 173 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 SLC25A39Q9BZJ4 359 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-206ENST00000476045 EDA2RQ9HAV5 297 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 MRPL27Q9P0M9 148 aaKnown RBP3.15□□□□□ -1.91
VPS13D-206ENST00000476045 PSG8Q9UQ74 426 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 KLF12Q9Y4X4 402 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.91
VPS13D-206ENST00000476045 TRAV9-2A0A087WT02 112 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 MUC21A0A0G2JKD1 596 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 MUC21A0A140T8X8 626 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 SERTM2A0A1B0GWG4 89 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 hDV102S1A0JD36 115 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 C2orf70A6NJV1 201 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 H0Y8G0 127 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 H3BRN7 92 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 K7EIM0 57 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 DLEU1O43261 78 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 SCGB2A1O75556 95 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 NDUFB8O95169 186 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 LTAP01374 205 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 IGKV1-17P01599 117 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 CSN3P07498 182 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 FCGR2BP31994 310 aaPredicted RBP3.14□□□□□ -1.91
VPS13D-206ENST00000476045 BMI1P35226 326 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 PLP1P60201 277 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 RIGQ13278 110 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 MUC21Q5SSG8 566 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 FAM162BQ5T6X4 162 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 Q6ZVH6 145 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 ATP5L2Q7Z4Y8 100 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 MRPL52Q86TS9 123 aaKnown RBP3.14□□□□□ -1.91
VPS13D-206ENST00000476045 GPHB5Q86YW7 130 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 STPG4Q8N801 248 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 MPLKIPQ8TAP9 179 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 ZC2HC1AQ96GY0 325 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 SPAG8Q99932 426 aaPredicted RBP3.14□□□□□ -1.91
VPS13D-206ENST00000476045 FAM110AQ9BQ89 295 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 SHANK2-AS3Q9BTD1 123 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 TPPP3Q9BW30 176 aa3.14□□□□□ -1.91
VPS13D-206ENST00000476045 TM2D2Q9BX73 214 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms