RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 C1orf158Q8N1D5 194 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 TMEM263Q8WUH6 116 aaKnown RBP7.54□□□□□ -1.2
COL12A1-206ENST00000474564 RNF183Q96D59 192 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 STAB1Q9NY15 2570 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 AGRNO00468 2067 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 GNRH2O43555 120 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 APCSP02743 223 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 OR5AL1P0C617 328 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 ARMS2P0C7Q2 107 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 FOXA3P55318 350 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-206ENST00000474564 NDUFA6P56556 154 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 TWIST1Q15672 202 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 LYZL1Q6UWQ5 148 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 CSNK1G2-AS1Q8NCQ2 148 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 GNB1LQ9BYB4 327 aa7.53□□□□□ -1.2
COL12A1-206ENST00000474564 TEX48A0A1B0GUV7 120 aa7.52□□□□□ -1.21
COL12A1-206ENST00000474564 H3BVH4 76 aa7.52□□□□□ -1.21
COL12A1-206ENST00000474564 GIG44P09565 113 aaPredicted RBP7.52□□□□□ -1.21
COL12A1-206ENST00000474564 TRGC1P0CF51 173 aa7.52□□□□□ -1.21
COL12A1-206ENST00000474564 SMIM17P0DL12 118 aa7.52□□□□□ -1.21
COL12A1-206ENST00000474564 GTSF1Q8WW33 167 aa7.52□□□□□ -1.21
COL12A1-206ENST00000474564 IGHV3-16A0A0C4DH30 117 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 MUC21A0A0G2JKD1 596 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 MUC21A0A140T8X8 626 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 M0R2P5 195 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 NHLRC4P0CG21 123 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-206ENST00000474564 RBMY1A1P0DJD3 496 aaKnown RBP7.51□□□□□ -1.21
COL12A1-206ENST00000474564 RBMY1CP0DJD4 496 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 DEFA6Q01524 100 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 RBMY1FQ15415 496 aaKnown RBP7.51□□□□□ -1.21
COL12A1-206ENST00000474564 NDUFAF3Q9BU61 184 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 GSN-AS1Q9NRJ2 163 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
COL12A1-206ENST00000474564 M0R381 172 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 S100A2P29034 98 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 CTRLP40313 264 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 EMP1P54849 157 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 LGALS9BQ3B8N2 356 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 ZNF876PQ49A33 203 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 Q6ZQT7 251 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 TMEM136Q6ZRR5 245 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 SSBP4Q9BWG4 385 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-206ENST00000474564 TP53TG3Q9ULZ0 132 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 NOTCH3Q9UM47 2321 aa7.5□□□□□ -1.21
COL12A1-206ENST00000474564 SNAI2O43623 268 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 SPART-AS1P0CW21 52 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 NTF3P20783 257 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 DAZ2Q13117 558 aaKnown RBP7.49□□□□□ -1.21
COL12A1-206ENST00000474564 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 SBSPONQ8IVN8 264 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 RNASE8Q8TDE3 154 aaKnown RBP7.49□□□□□ -1.21
COL12A1-206ENST00000474564 PTH2Q96A98 100 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 C9orf85Q96MD7 179 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 B9D2Q9BPU9 175 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 OVOL2Q9BRP0 275 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
COL12A1-206ENST00000474564 TRGV2A0A075B6R0 118 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 TRGV1A0A0A0MS02 117 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 A0A1B0GXF2 115 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 A8MWV9 139 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 CIDEAO60543 219 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BKO60814 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BJP06899 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 RNASE3P12724 160 aaKnown RBP7.48□□□□□ -1.21
COL12A1-206ENST00000474564 AZU1P20160 251 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BOP23527 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BBP33778 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BDP58876 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BCP62807 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST2H2BEQ16778 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 KIAA1644Q3SXP7 199 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.48□□□□□ -1.21
COL12A1-206ENST00000474564 BAGE3Q86Y29 109 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BHQ93079 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BNQ99877 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 HIST1H2BMQ99879 126 aa7.48□□□□□ -1.21
COL12A1-206ENST00000474564 NOP10Q9NPE3 64 aaKnown RBP7.48□□□□□ -1.21
COL12A1-206ENST00000474564 IGHV4-4A0A075B6R2 117 aa7.47□□□□□ -1.21
COL12A1-206ENST00000474564 IGHV4-28A0A0C4DH34 117 aa7.47□□□□□ -1.21
COL12A1-206ENST00000474564 SRIP30626 198 aa7.47□□□□□ -1.21
COL12A1-206ENST00000474564 TM2D3Q9BRN9 247 aa7.47□□□□□ -1.21
COL12A1-206ENST00000474564 SCRT2Q9NQ03 307 aa7.47□□□□□ -1.21
COL12A1-206ENST00000474564 X6R8D5 127 aa7.47□□□□□ -1.21
COL12A1-206ENST00000474564 RHODO00212 210 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 MGPP08493 103 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 AKR1D1P51857 326 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 SNRPEP62304 92 aaKnown RBP7.46□□□□□ -1.22
COL12A1-206ENST00000474564 C11orf72Q8NBR9 251 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 OR4C5Q8NGB2 326 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 OR10AG1Q8NH19 301 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 RASL10AQ92737 203 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
COL12A1-206ENST00000474564 F5H697 171 aa7.45□□□□□ -1.22
COL12A1-206ENST00000474564 PRM2P04554 102 aa7.45□□□□□ -1.22
COL12A1-206ENST00000474564 DAD1P61803 113 aa7.45□□□□□ -1.22
COL12A1-206ENST00000474564 SLAQ13239 276 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms