RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 PTH2Q96A98 100 aa12.77□□□□□ -0.37
CCDC78-208ENST00000471861 SGK494Q96LW2 274 aa12.77□□□□□ -0.37
CCDC78-208ENST00000471861 SAMD10Q9BYL1 202 aa12.77□□□□□ -0.37
CCDC78-208ENST00000471861 NUDT15Q9NV35 164 aa12.77□□□□□ -0.37
CCDC78-208ENST00000471861 ATRAIDQ6UW56 229 aa12.76□□□□□ -0.37
CCDC78-208ENST00000471861 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
CCDC78-208ENST00000471861 LINC00479Q96M42 142 aa12.76□□□□□ -0.37
CCDC78-208ENST00000471861 NMES1Q9C002 83 aa12.76□□□□□ -0.37
CCDC78-208ENST00000471861 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
CCDC78-208ENST00000471861 UBE2WQ96B02 151 aa12.75□□□□□ -0.37
CCDC78-208ENST00000471861 RBM38Q9H0Z9 239 aaKnown RBP12.75□□□□□ -0.37
CCDC78-208ENST00000471861 SH3BGRL3Q9H299 93 aa12.75□□□□□ -0.37
CCDC78-208ENST00000471861 OR5AC2Q9NZP5 309 aa12.75□□□□□ -0.37
CCDC78-208ENST00000471861 MBD2Q9UBB5 411 aa12.75□□□□□ -0.37
CCDC78-208ENST00000471861 A0A087WWC5 75 aa12.74□□□□□ -0.37
CCDC78-208ENST00000471861 LYRM1O43325 122 aa12.74□□□□□ -0.37
CCDC78-208ENST00000471861 FFAR4Q5NUL3 377 aa12.74□□□□□ -0.37
CCDC78-208ENST00000471861 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
CCDC78-208ENST00000471861 OR2T35Q8NGX2 323 aa12.74□□□□□ -0.37
CCDC78-208ENST00000471861 CCDC160A6NGH7 325 aa12.73□□□□□ -0.37
CCDC78-208ENST00000471861 C17orf112F2Z3M2 114 aa12.73□□□□□ -0.37
CCDC78-208ENST00000471861 H0YIZ8 118 aa12.73□□□□□ -0.37
CCDC78-208ENST00000471861 PANO1I0J062 215 aa12.73□□□□□ -0.37
CCDC78-208ENST00000471861 ZFP2Q6ZN57 461 aa12.73□□□□□ -0.37
CCDC78-208ENST00000471861 ARL6IP6Q8N6S5 226 aa12.73□□□□□ -0.37
CCDC78-208ENST00000471861 JPT2Q9H910 190 aa12.73□□□□□ -0.37
CCDC78-208ENST00000471861 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.73□□□□□ -0.37
CCDC78-208ENST00000471861 TAS2R45P59539 299 aa12.72□□□□□ -0.37
CCDC78-208ENST00000471861 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
CCDC78-208ENST00000471861 GCGP01275 180 aa12.71□□□□□ -0.37
CCDC78-208ENST00000471861 FAM74A1Q5RGS3 127 aa12.71□□□□□ -0.37
CCDC78-208ENST00000471861 TAAR5O14804 337 aa12.7□□□□□ -0.38
CCDC78-208ENST00000471861 Q6ZRU5 148 aa12.7□□□□□ -0.38
CCDC78-208ENST00000471861 A8MWV9 139 aa12.69□□□□□ -0.38
CCDC78-208ENST00000471861 SIX6O95475 246 aa12.69□□□□□ -0.38
CCDC78-208ENST00000471861 SEC11BP0C7V7 166 aa12.69□□□□□ -0.38
CCDC78-208ENST00000471861 C14orf177Q52M58 125 aa12.69□□□□□ -0.38
CCDC78-208ENST00000471861 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
CCDC78-208ENST00000471861 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
CCDC78-208ENST00000471861 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
CCDC78-208ENST00000471861 LRRC37A5PQ49AS3 106 aa12.68□□□□□ -0.38
CCDC78-208ENST00000471861 CHCHD7Q9BUK0 85 aa12.68□□□□□ -0.38
CCDC78-208ENST00000471861 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
CCDC78-208ENST00000471861 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
CCDC78-208ENST00000471861 PIK3CD-AS1Q5SR53 167 aa12.67□□□□□ -0.38
CCDC78-208ENST00000471861 ENHOQ6UWT2 76 aa12.67□□□□□ -0.38
CCDC78-208ENST00000471861 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
CCDC78-208ENST00000471861 A0A087WX48 190 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 USP17L23D6RBM5 183 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
CCDC78-208ENST00000471861 TCRAP04437 139 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 PRSS1P07477 247 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 ASIPP42127 132 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 PQLC2Q6ZP29 291 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 C1orf43Q9BWL3 253 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 PSG8Q9UQ74 426 aa12.66□□□□□ -0.38
CCDC78-208ENST00000471861 C9orf163Q8N9P6 203 aa12.65□□□□□ -0.38
CCDC78-208ENST00000471861 SERTM2A0A1B0GWG4 89 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 RAB2AP61019 212 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 Q0VG73 95 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 ODF1Q14990 250 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 ELOBQ15370 118 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 SMUG1Q53HV7 270 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 OR10G7Q8NGN6 311 aa12.64□□□□□ -0.39
CCDC78-208ENST00000471861 C5orf17Q8NAS9 161 aa12.63□□□□□ -0.39
CCDC78-208ENST00000471861 SMIM3Q9BZL3 60 aa12.63□□□□□ -0.39
CCDC78-208ENST00000471861 HSPB11Q9Y547 144 aa12.63□□□□□ -0.39
CCDC78-208ENST00000471861 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
CCDC78-208ENST00000471861 OR2G3Q8NGZ4 309 aa12.62□□□□□ -0.39
CCDC78-208ENST00000471861 HLA-DQA1P01909 254 aa12.61□□□□□ -0.39
CCDC78-208ENST00000471861 ARL14EPLP0DKL9 152 aa12.61□□□□□ -0.39
CCDC78-208ENST00000471861 S100A4P26447 101 aaKnown RBP12.61□□□□□ -0.39
CCDC78-208ENST00000471861 ZFP69Q49AA0 526 aa12.61□□□□□ -0.39
CCDC78-208ENST00000471861 MPV17L2Q567V2 206 aa12.61□□□□□ -0.39
CCDC78-208ENST00000471861 SDIM1Q6ZPB5 146 aa12.61□□□□□ -0.39
CCDC78-208ENST00000471861 PRNTQ86SH4 94 aa12.61□□□□□ -0.39
CCDC78-208ENST00000471861 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
CCDC78-208ENST00000471861 H3BVH4 76 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 RHODO00212 210 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 UBE2D3P61077 147 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 UBE2D2P62837 147 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
CCDC78-208ENST00000471861 FAM74A4Q5TZK3 123 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 DGAT2L7PQ6IED9 249 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 C15orf54Q8N8G6 183 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 SCGB1C1Q8TD33 95 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 WFDC1Q9HC57 220 aa12.6□□□□□ -0.39
CCDC78-208ENST00000471861 A0A087WWL8 130 aa12.59□□□□□ -0.39
CCDC78-208ENST00000471861 A0A1W2PPV4 95 aa12.59□□□□□ -0.39
CCDC78-208ENST00000471861 KCNIP4Q6PIL6 250 aa12.59□□□□□ -0.39
CCDC78-208ENST00000471861 ZC2HC1AQ96GY0 325 aa12.59□□□□□ -0.39
CCDC78-208ENST00000471861 A0A0D9SG52 128 aa12.58□□□□□ -0.4
CCDC78-208ENST00000471861 CRPP02741 224 aa12.58□□□□□ -0.4
CCDC78-208ENST00000471861 KRTAP26-1Q6PEX3 210 aa12.58□□□□□ -0.4
CCDC78-208ENST00000471861 SUN5Q8TC36 379 aa12.58□□□□□ -0.4
CCDC78-208ENST00000471861 FAM240BA0A1B0GVZ2 78 aa12.57□□□□□ -0.4
CCDC78-208ENST00000471861 K7EQM0 130 aa12.57□□□□□ -0.4
CCDC78-208ENST00000471861 H2BFSP57053 126 aa12.57□□□□□ -0.4
CCDC78-208ENST00000471861 PPP1R1CQ8WVI7 109 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms